prot_Ecto-sp13_S_contig8578.19985.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8578.19985.1
Unique Nameprot_Ecto-sp13_S_contig8578.19985.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp13_S_contig8578.19985.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.120e-63
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0
Query:    1 VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVSSVNHQRLLSGARWRGGGGGVSRRAARKGSGVTVRREESHTRVETEAVLKRIVRVQ 108
            VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVSSVNHQRLLSGARWRGGGGGVSRRAARKGSGVTVRREESHTRVETEAV+KRIVRVQ
Sbjct:  786 VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVSSVNHQRLLSGARWRGGGGGVSRRAARKGSGVTVRREESHTRVETEAVMKRIVRVQ 893          
BLAST of mRNA_Ecto-sp13_S_contig8578.19985.1 vs. uniprot
Match: A0A7S2A7N5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7N5_TRICV)

HSP 1 Score: 54.7 bits (130), Expect = 2.330e-6
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    1 VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVSS 54
             F PPAPSNWGLPDDG  Y Y +SFP+L+++ +G VR  K+  +   + R  +S
Sbjct:  166 TFTPPAPSNWGLPDDGRTYHY-VSFPKLDRNLFGKVRPPKQWDQIKKKRRRGAS 218          
BLAST of mRNA_Ecto-sp13_S_contig8578.19985.1 vs. uniprot
Match: A0A7S1YZ68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ68_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.370e-6
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVSSV 55
             F PP PSNWGLPDDG  Y YG+ FP+L+   +G +R+ K+ +    + R  SS 
Sbjct:  901 TFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPKQ-WSAKQKQRGASSA 953          
BLAST of mRNA_Ecto-sp13_S_contig8578.19985.1 vs. uniprot
Match: A0A7S4R4H9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.400e-6
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVSSV 55
             F PP PSNWGLPDDG  Y YG+ FP+L+   +G +R+ K+ +    + R  SS 
Sbjct: 1031 TFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPKQ-WSAKQKQRGASSA 1083          
BLAST of mRNA_Ecto-sp13_S_contig8578.19985.1 vs. uniprot
Match: A0A7S4R4H5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.410e-6
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVSSV 55
             F PP PSNWGLPDDG  Y YG+ FP+L+   +G +R+ K+ +    + R  SS 
Sbjct: 1298 TFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPKQ-WSAKQKQRGASSA 1350          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8578.19985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LU92_ECTSI1.120e-6399.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2A7N5_TRICV2.330e-648.15Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1YZ68_9STRA2.370e-645.45Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4R4H9_9STRA2.400e-645.45Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4R4H5_9STRA2.410e-645.45Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8578contigEcto-sp13_S_contig8578:679..1275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8578.19985.1mRNA_Ecto-sp13_S_contig8578.19985.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8578 679..1275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8578.19985.1 ID=prot_Ecto-sp13_S_contig8578.19985.1|Name=mRNA_Ecto-sp13_S_contig8578.19985.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
VFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHR
NVSSVNHQRLLSGARWRGGGGGVSRRAARKGSGVTVRREESHTRVETEAV
LKRIVRVQ
back to top