prot_Ecto-sp13_S_contig8575.19983.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8575.19983.1
Unique Nameprot_Ecto-sp13_S_contig8575.19983.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.420e-28
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL
Sbjct:  998 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 1049          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: D8LDI0_ECTSI (Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI0_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.420e-28
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL
Sbjct:  964 KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 1015          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A7S4E930_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E930_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.170e-25
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GKV+TEEEDAFLLNMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA+EL
Sbjct:  130 RGKVWTEEEDAFLLNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNASEL 181          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A835ZE29_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE29_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.640e-25
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GK +TEEEDAFL+NMMHRYGYGNWEVIR +I+KAWQF FDWFFKSRNAAEL
Sbjct:  873 KGKTYTEEEDAFLINMMHRYGYGNWEVIRTQIKKAWQFHFDWFFKSRNAAEL 924          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A8J2SZN3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZN3_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.650e-24
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GKV+TEEEDAFLLNMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA+EL
Sbjct:  979 RGKVWTEEEDAFLLNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNASEL 1030          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: F0YAG6_AURAN (Uncharacterized protein RUV1 n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG6_AURAN)

HSP 1 Score: 99.8 bits (247), Expect = 3.630e-23
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GKV+TEEEDAFL+NMMH YGYGNWE IR+EIR AWQF FDWFFKSRNA EL
Sbjct:  884 RGKVWTEEEDAFLVNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNAQEL 935          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A7S1BGS6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGS6_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.520e-21
Identity = 40/52 (76.92%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +G+ +TEEEDAFL++MM R+G+G+WE IRMEIRKAWQFRFDWFFKSRNA EL
Sbjct:  647 KGRAYTEEEDAFLVSMMFRHGFGSWERIRMEIRKAWQFRFDWFFKSRNAVEL 698          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A7S1XXH0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXH0_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.240e-21
Identity = 36/52 (69.23%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GK++T EED FL+NMMHR+GYG WE IR+E+R+AWQFRFDW+FKSR+A E+
Sbjct:  187 KGKMYTLEEDVFLINMMHRHGYGEWERIRLEVRRAWQFRFDWYFKSRSAPEI 238          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A7S2SFZ0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFZ0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.290e-21
Identity = 38/52 (73.08%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +GK++TEEEDAFL+ MMHR+GYG W+ IR EIR+AWQF+FDWFFKSRN++EL
Sbjct:  985 RGKIWTEEEDAFLVCMMHRHGYGQWDRIRQEIRRAWQFKFDWFFKSRNSSEL 1036          
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Match: A0A7S2LJ18_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LJ18_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 9.850e-21
Identity = 37/52 (71.15%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAEL 52
            +G+ +TEEEDAFL+ MMH +GYG  E IRM+IR+AWQFRFDWFFKSRNA E+
Sbjct:   17 KGRAYTEEEDAFLVCMMHHHGYGAAERIRMDIRRAWQFRFDWFFKSRNATEI 68          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8575.19983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHP7_9PHAE1.420e-2898.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDI0_ECTSI1.420e-2898.08Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S4E930_9STRA3.170e-2584.62Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZE29_9STRA4.640e-2584.62P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8J2SZN3_9STRA7.650e-2484.62Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0YAG6_AURAN3.630e-2382.69Uncharacterized protein RUV1 n=2 Tax=Aureococcus a... [more]
A0A7S1BGS6_9STRA1.520e-2176.92Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1XXH0_9STRA3.240e-2169.23Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SFZ0_9STRA5.290e-2173.08Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S2LJ18_9STRA9.850e-2171.15Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015195SLIDE domainPFAMPF09111SLIDEcoord: 2..52
e-value: 1.6E-22
score: 79.7
NoneNo IPR availableGENE3D1.10.10.60coord: 1..52
e-value: 4.8E-22
score: 79.8
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 2..51
NoneNo IPR availablePANTHERPTHR10799:SF979coord: 2..51
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8575contigEcto-sp13_S_contig8575:1288..1624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8575.19983.1mRNA_Ecto-sp13_S_contig8575.19983.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8575 1288..1624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8575.19983.1 ID=prot_Ecto-sp13_S_contig8575.19983.1|Name=mRNA_Ecto-sp13_S_contig8575.19983.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
QGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAA
EL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015195SLIDE
IPR009057Homeobox-like_sf