prot_Ecto-sp13_S_contig8574.19982.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8574.19982.1
Unique Nameprot_Ecto-sp13_S_contig8574.19982.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length235
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8574.19982.1 vs. uniprot
Match: A0A6H5JUU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU6_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 4.620e-111
Identity = 176/191 (92.15%), Postives = 183/191 (95.81%), Query Frame = 0 
Query:    1 MVRKKMKRVADAVTADNEAASGLTGTVCSWLKDLDLVGHELLPAISSDLDIFSLLCRAGESSAGSRTAESKFAQARGLQALRAAVAGGSASVEDLRLIFLYGLLLYVDPGTSHLRKAIKNLLGATEKVIQEQQLKSGNSSMADSIAKLVAARLAKRSWDLQAGVAATHNEADPPGRTVTSAAAAVRTAVSV 191
            MVRKKMKRVAD +TADN+AASGLTGTVCSWLKDLDLVGHELLPAISSDLDIFSLLCRAGESSAGS TAESKFAQARGLQALRAAVAGGSASVEDLRLIFLYGLLLY+DPGTSHLRKAIKNLLGATEKVIQEQQL+SGNSSM DSIA LVAARLAKRSWDLQAG AATH+EADP G T T+AAAAVRTAVS+
Sbjct:    1 MVRKKMKRVADELTADNKAASGLTGTVCSWLKDLDLVGHELLPAISSDLDIFSLLCRAGESSAGSSTAESKFAQARGLQALRAAVAGGSASVEDLRLIFLYGLLLYIDPGTSHLRKAIKNLLGATEKVIQEQQLESGNSSMTDSIAGLVAARLAKRSWDLQAGAAATHDEADPSGGTATAAAAAVRTAVSL 191
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BLAST of mRNA_Ecto-sp13_S_contig8574.19982.1 vs. uniprot
Match: D7FZE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE0_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 2.030e-105
Identity = 192/224 (85.71%), Postives = 201/224 (89.73%), Query Frame = 0 
Query:    1 MVRKKMKRVADAVTADNEAASGLTGTVCSWLKDLDLVGHELLPAISSDLDIFSLLCRAGESSAGSRTAESKFAQARGLQALRAAVAGGSASVEDLRLIFLYGLLLYVDPGTSHLRKAIKNLLGATEKVIQEQQLKSGNSSMADSIAKLVAARLAKRSWDLQAGVAATHNEADPPGRTVTSAAAAVRTAVSVQRLMEVSAGKRALVAAQEGAILFRFIEVLDASL 224
            MVRKKMKRVADAV  DN+ ASGLTGTVCSWLKDLDLVGHELLP ISSDLDI +L CR GE+SAGS   ESKFAQARGLQALRAAVAGGSASVEDLRLIFLYGLLLY+DPGTSHLRKAIK+LLGATEK+IQEQQL+SGNSSM DSIA LVAAR AKRSWDLQAG AATH+ AD  G T T AAAAVRTAVS+QRLMEV AGKRALVAAQEG IL RFIEVLDASL
Sbjct:    1 MVRKKMKRVADAVPPDNQDASGLTGTVCSWLKDLDLVGHELLPTISSDLDISNLPCRTGETSAGSSAVESKFAQARGLQALRAAVAGGSASVEDLRLIFLYGLLLYIDPGTSHLRKAIKSLLGATEKIIQEQQLESGNSSMTDSIAGLVAARFAKRSWDLQAGAAATHDGADRSGGTAT-AAAAVRTAVSLQRLMEVPAGKRALVAAQEGVILLRFIEVLDASL 223
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BLAST of mRNA_Ecto-sp13_S_contig8574.19982.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.740e-5
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0 
Query:  195 MEVSAGKRALVAAQEGAILFRFIEVLDASL 224
            MEVSAGKRALVAAQEGAILFRFIEVLDASL
Sbjct:    1 MEVSAGKRALVAAQEGAILFRFIEVLDASL 30
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8574.19982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JUU6_9PHAE4.620e-11192.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZE0_ECTSI2.030e-10585.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLM6_9PHAE1.740e-5100.00Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8574contigEcto-sp13_S_contig8574:847..2946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8574.19982.1mRNA_Ecto-sp13_S_contig8574.19982.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8574 661..2950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8574.19982.1 ID=prot_Ecto-sp13_S_contig8574.19982.1|Name=mRNA_Ecto-sp13_S_contig8574.19982.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=235bp
MVRKKMKRVADAVTADNEAASGLTGTVCSWLKDLDLVGHELLPAISSDLD
IFSLLCRAGESSAGSRTAESKFAQARGLQALRAAVAGGSASVEDLRLIFL
YGLLLYVDPGTSHLRKAIKNLLGATEKVIQEQQLKSGNSSMADSIAKLVA
ARLAKRSWDLQAGVAATHNEADPPGRTVTSAAAAVRTAVSVQRLMEVSAG
KRALVAAQEGAILFRFIEVLDASLKRNQCRSQRQ*
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