prot_Ecto-sp13_S_contig857.19977.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig857.19977.1
Unique Nameprot_Ecto-sp13_S_contig857.19977.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length544
Homology
BLAST of mRNA_Ecto-sp13_S_contig857.19977.1 vs. uniprot
Match: D7G585_ECTSI (MCU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G585_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 6.810e-177
Identity = 291/353 (82.44%), Postives = 306/353 (86.69%), Query Frame = 0
Query:  141 AQARKDRCSRARKTARRETAAADSQLISLARRVEKLQRTLNDERASRQSAESKHHQAKSTTIRISRYLDSILNVNQELVAAGTPSSKTPTARQPVPRALGELQRKQSISDSYATPRQNSALEGDGIDIRAAVNEALSVGRTGGDPVPSLTALYERIGFSAMQGDNSHHGGTPSLPTSPSRARVGNAAEAYRFRDVHDGEDYGRQRLVEPTAVGGFFAEDDTEVLESSRRQASGHQVDNRGSRPANGRKHHGTGNAFVGGGVTTKGYSFASSPLVRPTSAAERSPEVVKRLEALASQLERERSHVEDWYKDVVHRA--SPCVQEEGTDADLDARSLTEAIICCLQEKSQQLDVV 491
            AQARKDRCSRARKTARRETAAADSQL SLARR+EKLQRTL+DERASRQSAE KHH+AKSTTIRISRYLDSILNVNQELVAAGT SS TPTA QPVPRALGELQRKQSI DSYATPR+N ALE DGIDIRAAV EA  VGRTGGDPVPSLTALYERIGFSAMQG++ HHGGTPSLPTSP RARVGN AEAYRFRDV DGEDYGRQRLVEPTAVGGFFAEDD EVLESSRRQAS HQVD+ GSR ANG KHHGTGNAFVGGGVT KGYSFA+SPLVRPTSAAERSPEV+KRLEALASQLERERS VE WYKDVVHR+  + C      D  + A    E +   + E SQ+L  V
Sbjct:    6 AQARKDRCSRARKTARRETAAADSQLTSLARRLEKLQRTLDDERASRQSAELKHHRAKSTTIRISRYLDSILNVNQELVAAGTSSSLTPTAGQPVPRALGELQRKQSIRDSYATPRRNPALEDDGIDIRAAVKEAYCVGRTGGDPVPSLTALYERIGFSAMQGEDGHHGGTPSLPTSPRRARVGNTAEAYRFRDVDDGEDYGRQRLVEPTAVGGFFAEDDAEVLESSRRQASAHQVDDGGSRSANGGKHHGTGNAFVGGGVTAKGYSFANSPLVRPTSAAERSPEVMKRLEALASQLERERSDVEQWYKDVVHRSPHAHCGPSPPHDRQVPACKRRELMRILMPEASQKLYTV 358          
BLAST of mRNA_Ecto-sp13_S_contig857.19977.1 vs. uniprot
Match: A0A6H5KP00_9PHAE (MCU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP00_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 1.520e-136
Identity = 228/282 (80.85%), Postives = 236/282 (83.69%), Query Frame = 0
Query:  173 VEKLQRTLNDERASRQSAESKHHQAKSTTIRISRYLDSILNVNQELVAAGTPSSKTPTARQPVPRALGELQRKQSISDSYATPRQNSALEGDGIDIRAAVNEALSVGRTGGDPVPSLTALYERIGFSAMQGDNSHHGGTPSLPTSPSRARVGNAAEAYRFRDVHDGEDYGRQRLVEPTAVGGFFAEDDTEVLESSRRQASGHQVDNRGSRPANGRKHHGTGNAFVGGGVTTKGYSFASSPLVRPTSAAERSPEVVKRLEALASQLERERSHVEDWYKDVVHR 454
            ++KLQRTLNDER+SRQS E KHH+AKSTTIRI RYLDSILNVNQELVAAGTPSS TPTARQPVPRALGELQRKQSI DSYATPRQNSALEGDGIDIRAAVNEAL VGRTGGDPVPSL ALYERIGFSA+QG++ HHGG PSLPTSP RARVGNAAEAYR R VHDGEDYGRQRLVEPTA GG                         GSRPANG KHHG GNAFVGG V  KGYSFA+SPLVRPTSAAERSPEV KRLEALASQLERERS VE WYKDVVHR
Sbjct:  100 LQKLQRTLNDERSSRQSTEFKHHRAKSTTIRIGRYLDSILNVNQELVAAGTPSSLTPTARQPVPRALGELQRKQSIRDSYATPRQNSALEGDGIDIRAAVNEALGVGRTGGDPVPSLAALYERIGFSAIQGEDRHHGGAPSLPTSPRRARVGNAAEAYRSRYVHDGEDYGRQRLVEPTAAGGXXXXXXXXXXXXXXXXXXXXXXXXGGSRPANGGKHHGIGNAFVGGAVAAKGYSFANSPLVRPTSAAERSPEVAKRLEALASQLERERSDVEQWYKDVVHR 381          
BLAST of mRNA_Ecto-sp13_S_contig857.19977.1 vs. uniprot
Match: A0A7R9YA16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA16_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.930e-14
Identity = 73/251 (29.08%), Postives = 129/251 (51.39%), Query Frame = 0
Query:    1 MDELQSSRAILAALRGLQDKVRRLENERTQAVEEVQTFKDELVQRGEDFKHAQELQNLTIQEESAASRLSYERLLAEKRLVDNRLEETKASGPKKGELKRELQKACETARDRGQDSHVAQLAAEAKASFLERRVNECEHIAQARKDRCSRARKTARRETAAADSQLISLARRVEKLQRTLNDERASRQSAESKHHQAKSTTIRISRYLDSILNVNQELVAAGTPSSKTPTARQPVPRALGELQRKQSISDS 251
            M +   SRA+L+ALR LQDK++RLE ER++A++EV   K +L +     K ++EL+ LT  E+  ASRL+ ER+ AEK++V+ RL + +       E K  L+K  +  R    +S +A+  A+   S ++  V E E      K + + A +   +E    D + I L   ++K++  L +E+  R  A ++         R+  +L  ++ +N++LV +        T   P  R   + +R++   D+
Sbjct:  222 MSDSSGSRAVLSALRALQDKIKRLEGERSKALDEVNALKQQLEEAEASAKRSRELEKLTNSEQVHASRLANERVTAEKKVVEMRLSKAE-------EHKASLRKEIDALRKAASESEIARRTADGNLSVVQGHVRELEGELDDMKAQLAVAHEELAKERDERDQREIELGVVIQKIEEQLREEKTMRCEAVTEKE-------RLDEFLKGVVAINEDLVRSIAKGDNAGTGALPKARRGRKTKRRKEPLDT 458          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig857.19977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G585_ECTSI6.810e-17782.44MCU domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KP00_9PHAE1.520e-13680.85MCU domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7R9YA16_9STRA6.930e-1429.08Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..41
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availableCOILSCoilCoilcoord: 166..193
IPR025913Cep57 centrosome localisation domainPFAMPF14073Cep57_CLDcoord: 9..67
e-value: 1.3E-7
score: 31.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig857contigEcto-sp13_S_contig857:189..4053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig857.19977.1mRNA_Ecto-sp13_S_contig857.19977.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig857 189..4053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig857.19977.1 ID=prot_Ecto-sp13_S_contig857.19977.1|Name=mRNA_Ecto-sp13_S_contig857.19977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=544bp
MDELQSSRAILAALRGLQDKVRRLENERTQAVEEVQTFKDELVQRGEDFK
HAQELQNLTIQEESAASRLSYERLLAEKRLVDNRLEETKASGPKKGELKR
ELQKACETARDRGQDSHVAQLAAEAKASFLERRVNECEHIAQARKDRCSR
ARKTARRETAAADSQLISLARRVEKLQRTLNDERASRQSAESKHHQAKST
TIRISRYLDSILNVNQELVAAGTPSSKTPTARQPVPRALGELQRKQSISD
SYATPRQNSALEGDGIDIRAAVNEALSVGRTGGDPVPSLTALYERIGFSA
MQGDNSHHGGTPSLPTSPSRARVGNAAEAYRFRDVHDGEDYGRQRLVEPT
AVGGFFAEDDTEVLESSRRQASGHQVDNRGSRPANGRKHHGTGNAFVGGG
VTTKGYSFASSPLVRPTSAAERSPEVVKRLEALASQLERERSHVEDWYKD
VVHRASPCVQEEGTDADLDARSLTEAIICCLQEKSQQLDVVRESLKAFKA
SPPTPAITSPTLCPRKIAALNVLQGLCHDVQAIAREDGGLCAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025913Cep57_CLD