prot_Ecto-sp13_S_contig8558.19963.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8558.19963.1
Unique Nameprot_Ecto-sp13_S_contig8558.19963.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length358
Homology
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: D8LTF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF3_ECTSI)

HSP 1 Score: 553 bits (1424), Expect = 1.910e-189
Identity = 263/291 (90.38%), Postives = 267/291 (91.75%), Query Frame = 0
Query:   68 MSWVMPGDTPLSVDSSVPDGATSADYCCSDIFETTETVCGAGVEAPCRMPQEFEIKVDTCGVEGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGAEPPCMIPEVVETLPPRDVPDDTCGVVGIQGIRTGDKCCPLASAYHICLLALISIGGCGQCGSAGCGSIDMGYITPYLDHEPASNATSTSYCCTSSFTVKSPTCGDGVSPPCLIAAEDQGTGTVTATLAPEVASSLIDNCGLPDMPGIMDTSGTRCCPQ 358
            MSWVMPGD PLSVD SVPDGATSADYCC DIFETTETVCGAGVEAPCRMPQEFE KVDTCGV+GIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGAEPPCMIPEVVETLPPRD+PDDTCGVVGIQG+RTGDKCCPL               GCGQCG  GCGSIDMGYITPYLDHEPASNATSTSYCCTSSFTV SPTCGDGVSPPCLIAAEDQ T TVTATLAPEVASSLIDNCGLPD+PGIMDTSGTRCCPQ
Sbjct:    1 MSWVMPGDNPLSVDPSVPDGATSADYCCYDIFETTETVCGAGVEAPCRMPQEFETKVDTCGVDGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGAEPPCMIPEVVETLPPRDLPDDTCGVVGIQGVRTGDKCCPL---------------GCGQCGDTGCGSIDMGYITPYLDHEPASNATSTSYCCTSSFTVNSPTCGDGVSPPCLIAAEDQVTETVTATLAPEVASSLIDNCGLPDIPGIMDTSGTRCCPQ 276          
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: A0A6H5JLD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD2_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 7.190e-32
Identity = 77/195 (39.49%), Postives = 102/195 (52.31%), Query Frame = 0
Query:   36 CGVTD--GVLSDDGFLCCPAGCGTCGGLTCSSVPMSWVMPGDTPLSVDSSVPDGATSADYCCSDIFETTETVCGAGVE-----APCRMPQEFEIKVDTCGVEGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGE-CGVDGAEPPCMIPEVVETLPPRDVPDDT 222
            CG+ D  G++   G  CCP GCG CGG  C  V M+ V P     +V+  VP  A S DYCC+   ++ +  CG G        PC +P   ++  DTC VEG+EG++     CCPLGC  C G+GCG   +  +FP         PE +    +CC  AF ++   CG  G EPPC+IPE   + PP  VP DT
Sbjct:   81 CGLPDMPGIMDASGTRCCPQGCGMCGGPGCGLVDMNVVAP-----TVEGDVPIDAKSGDYCCTSGVDSRDVTCGTGTGDDEGYPPCFIP--VDLAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPD----GRELPEDATASSYCCLRAFVEIEVVCGDPGVEPPCVIPEGT-SRPPAAVPVDT 263          
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: D8LDY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY5_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 3.760e-16
Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 0
Query:  125 DTCGVEGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAF-RDVGECGVDGAEPPCMIPE 208
            DTC VEG+EG++G    CCPLGC  C GIGCG +  S +F          P G+ T  +CC SAF      CG  G EPPC+IPE
Sbjct:   68 DTCHVEGVEGVSGDGVYCCPLGCGQCGGIGCGSRDESLIFRDPR---RELPAGAGTSSYCCLSAFDSSTAVCGDLGVEPPCLIPE 149          
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.120e-11
Identity = 64/243 (26.34%), Postives = 88/243 (36.21%), Query Frame = 0
Query:   39 TDGVLSDDGFLCCPAGCGTCGGLTCSSVPMSWVMPGDTPLSVDSSVPDGATSADYCCSDIFETTETVCGAGVEAPC---------RMPQEFEIKVDTCGVEGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGAEPPCMI---PEVVETLPPRDVPDDTC--GVVGIQGIRTGDKCCPLASAYHICLLALISIGGCGQCGSAGCGS 267
            T+G+   +G +CCP GCG C G  C +   +                     ++ CC    ++    C    EAPC          +  E   +  TC  +G EG+ G    CCP+GC  C G GCG               T         + CC +  + +G    D  E PC+I   P+  +          TC  G  GI G   G  CCP+               GCGQC   GCG+
Sbjct:  342 TEGI-DGNGVVCCPIGCGQCAGDGCGTAGSA-----------------NGLGSESCCGGGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCS-DGTEGIDGNGVVCCPIGCGQCAGDGCG---------------TAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDG--NGVVCCPI---------------GCGQCAGDGCGT 533          
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.090e-10
Identity = 80/318 (25.16%), Postives = 104/318 (32.70%), Query Frame = 0
Query:   39 TDGV--LSDDGFLCCPAGCGTCGGLTCSSVPMSWVMPGDTPLSVDSSVPDGATSADYCCSDIFETTETVCGAGVEAPC---------------------RMPQEFEIKVDTCGVEGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGAEPPCMIPEVVETLPPRDVPDD-------------------TCGVVGIQGI-RTGDKCCPLASAYHICLLALISIGGCGQCGSAGCGSIDMGYITPYLDHEPASNATSTSYCCTSSFTVKSPTCGDGVSPPCLI 313
            +DG+  +  +G +CCP GCG C G  CS    +                +G TS+  CC    +++   C     APC                              V TC  +GIEG+ G    CCPLGC  C G GCG    +                  T   CC    +  G    D    PC    +  + P  D  DD                   TC    ++GI   G+ CCPL               GCGQCG +GC +              ASN      CC+S        C D    PC+I
Sbjct:  555 SDGIEGIDGNGVVCCPLGCGQCAGSGCSIAGAA----------------NGLTSSS-CCGGGIKSSGNYCDDTGVAPCIYGSAPNADDXXXXXXXXXXXXXXXXXXXDVGTCS-DGIEGIDGNGVVCCPLGCGQCAGSGCGAAGAA---------------NGLTSSSCCGGGIKSSGNYCDDTGVAPC----IYGSAPNAD--DDXXXXXXXXXXXXXXXXXATTCSN-DLEGIDHKGEVCCPL---------------GCGQCGGSGCST------------SGASNGLGAESCCSSEVKDSGRYCDDANEAPCII 805          
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 5.710e-9
Identity = 48/184 (26.09%), Postives = 69/184 (37.50%), Query Frame = 0
Query:   26 PPTDPVDATPCGVTDGVLSDDGFLCCPAGCGTCGGLTCSSVPMSWVMPGDTPLSVDSSVPDGATSADYCCSDIFETTETVCGAGVEAPCRM---PQEFEIKVDTCGVEGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGAEPPCMI 206
            P   P  A  C      +  +G +CCP GCG CGG  C++   +  + G +                 CC    + +   C    +APC +   P       +TC   G+EG+ G    CCPLGC  C G GC               +T+        D CC  + +   E   +  E PC+I
Sbjct:  260 PTPSPTSANTCSNGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDGSS-----------------CCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSETCS-NGVEGIDGNGVVCCPLGCGQCGGAGC---------------TTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCII 410          
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: A0A6H5JG71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG71_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 8.900e-9
Identity = 32/48 (66.67%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 FLTEIRATPPGWCTGEEDAREACALPPTDPVDATPCGVTDGVLSDDGF 48
            FLTEIRATPP WCTGEEDA EACALPPT     T  G TD  L  + F
Sbjct:   80 FLTEIRATPPDWCTGEEDASEACALPPTGIRTITHAGFTDRPLELNRF 127          
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.940e-6
Identity = 42/153 (27.45%), Postives = 59/153 (38.56%), Query Frame = 0
Query:   39 TDGVLSDDGFLCCPAGCGTCGGLTCSSVPMSWVMPGDTPLSVDSSVPDGATSADYCCSDIFETTETVCGAGVEAPC-------------RMPQEFEIKVDTCGVEGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGS 178
            T+G+   +G +CCP GCG CGG  CS+   +                     ++ CC    ++    C    EAPC              + +E      TC   GIEG+      CCPL C  C G GCG    ++   GE   S+    G+
Sbjct:  577 TEGI-DGNGVVCCPIGCGQCGGDGCSTAGSA-----------------NGLGSESCCGGGVKSLGVYCDDTNEAPCIIGSAPDTDDVDSGISEESADDTQTCS-NGIEGIDHKGEVCCPLACGQCGGTGCGSAGSAFELDGESCCSSQVLAGN 710          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8558.19963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LTF3_ECTSI1.910e-18990.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLD2_9PHAE7.190e-3239.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDY5_ECTSI3.760e-1648.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G651_ECTSI1.120e-1126.34Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JYT7_9PHAE2.090e-1025.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC43_9PHAE5.710e-926.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG71_9PHAE8.900e-966.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS5_9PHAE1.940e-627.45MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8558contigEcto-sp13_S_contig8558:3..6411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8558.19963.1mRNA_Ecto-sp13_S_contig8558.19963.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8558 3..6411 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8558.19963.1 ID=prot_Ecto-sp13_S_contig8558.19963.1|Name=mRNA_Ecto-sp13_S_contig8558.19963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp
FLTEIRATPPGWCTGEEDAREACALPPTDPVDATPCGVTDGVLSDDGFLC
CPAGCGTCGGLTCSSVPMSWVMPGDTPLSVDSSVPDGATSADYCCSDIFE
TTETVCGAGVEAPCRMPQEFEIKVDTCGVEGIEGLAGPANTCCPLGCANC
VGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGA
EPPCMIPEVVETLPPRDVPDDTCGVVGIQGIRTGDKCCPLASAYHICLLA
LISIGGCGQCGSAGCGSIDMGYITPYLDHEPASNATSTSYCCTSSFTVKS
PTCGDGVSPPCLIAAEDQGTGTVTATLAPEVASSLIDNCGLPDMPGIMDT
SGTRCCPQ
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