prot_Ecto-sp13_S_contig8557.19962.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8557.19962.1
Unique Nameprot_Ecto-sp13_S_contig8557.19962.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length715
Homology
BLAST of mRNA_Ecto-sp13_S_contig8557.19962.1 vs. uniprot
Match: D8LRL8_ECTSI (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL8_ECTSI)

HSP 1 Score: 977 bits (2526), Expect = 0.000e+0
Identity = 602/717 (83.96%), Postives = 613/717 (85.50%), Query Frame = 0
Query:    1 DVSRDTLVSHADLLLQLGVDPAGLKDRYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFEQSGAPSTPSASSTPAPPTATEAPPETQQQGQQKEGDTATTAVANDQDKKTHAGLISLVQASVGRFFDLLYAKVDQSLDANSSNPQPRSHAPSEAGAGAAGKKSEGQLQGGXXXXXXXXXXXXX-DLDPVALGGVVAAVQQLVTDIETVDPHVPQQVQLARRAKDFAQEFKRGQVRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDILTDAVDTGYPGAAGGGMTXXXXXXXXXXXXXXXXXXXXXGGSGEGGRYPALVDRALGTLLKARQTDRLTTDEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASALGIVAGVTGGSSSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSXXXXXXXXXXXXXXXXXXXXAGTAAAEVEACLIGDEVRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQIPLTLDQSVHAPPPSMHFTGSIHSTRSVTSTLKSAATEKSIEGDDXXXXXXXXXX-RGGPVLGRRRQLDAVRNRVSAAARFILEYYAETTGRRLADVLQVGLEAPPGDAGDWFSVEEPTGVGEAVLDALELAEDNVKEVCAFLGETRSGTVSVTRSGDRDLRRGSSVALLSGTGRNGRGGIGGGGGVRRDIDRIFESSGADGG 715
            DVSRDTLVSHADLLLQLGVDPAGLK+RYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFE++GA  TPSASSTPAP                     ATTAVA    KKTH GLI+LVQASVGRFFDLLYAKVDQSLDANSSNPQPRSH PSEAGAGAAGKKSEG+    XXXXXXXXXXXXX DLDPVALGGVVAAVQQLVTDIETVDPHVPQ                   VRRAFRVLCRTSLSVTTSMVNAVRAGTPPED+L D +DTG+PGAAGGGMT       XXXXXXXXXXXXX GGSGEGGRYPALVDRALGTL+K         DEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASA GIVAGVTGG+SSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPS       XXXXXXXXXXX        E EA + GDEVRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQIPLTLDQSVHA PPSMHFTGSIHSTR    TLKSAATEKSIEGDD    XXXXXX RGGPVLGRRRQLDAVRNRVSAAARFILEYYAETTGRRLADVLQVGLEAPPGDAGDWFSVEEPTGVGEAVLDALELAEDNVKEVCAFLGE RSGTVSVTR GDRDLRRGSSVALLSGTGRNGRGGIGGGGGVRRDIDRIFESSGA GG
Sbjct:  243 DVSRDTLVSHADLLLQLGVDPAGLKERYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFERTGALPTPSASSTPAPXXXXXXXXXXXXXXXXXXXXXATTAVA----KKTHTGLIALVQASVGRFFDLLYAKVDQSLDANSSNPQPRSHVPSEAGAGAAGKKSEGRXXXXXXXXXXXXXXXXXXDLDPVALGGVVAAVQQLVTDIETVDPHVPQ-------------------VRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDVLADGLDTGHPGAAGGGMTGASGRHGXXXXXXXXXXXXXAGGSGEGGRYPALVDRALGTLMKR-------ADEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASAFGIVAGVTGGASSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSPSPDTKAXXXXXXXXXXX--------EEEAAVSGDEVRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQIPLTLDQSVHALPPSMHFTGSIHSTRXXXXTLKSAATEKSIEGDDDAAGXXXXXXGRGGPVLGRRRQLDAVRNRVSAAARFILEYYAETTGRRLADVLQVGLEAPPGDAGDWFSVEEPTGVGEAVLDALELAEDNVKEVCAFLGEARSGTVSVTRFGDRDLRRGSSVALLSGTGRNGRGGIGGGGGVRRDIDRIFESSGAGGG 921          
BLAST of mRNA_Ecto-sp13_S_contig8557.19962.1 vs. uniprot
Match: A0A6H5JIJ8_9PHAE (Vacuolar protein sorting-associated protein 51 homolog (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ8_9PHAE)

HSP 1 Score: 805 bits (2079), Expect = 6.380e-282
Identity = 506/623 (81.22%), Postives = 516/623 (82.83%), Query Frame = 0
Query:    1 DVSRDTLVSHADLLLQLGVDPAGLKDRYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFEQSGAPSTPSASSTPAPPTATEAPPETQQQGQQKEGDTATTAVANDQDKKTHAGLISLVQASVGRFFDLLYAKVDQSLDANSSNPQPRSHAPSEAGAGAAGKKSEGQLQGGXXXXXXXXXXXXXDLDPVALGGVVAAVQQLVTDIETVDPHVPQQVQLARRAKDFAQEFKRGQVRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDILTDAVDTGYPGAAGGGMTXXXXXXXXXXXXXXXXXXXXXGGSGEGGRYPALVDRALGTLLKARQTDRLT-----------------------------------------------------------------TDEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASALGIVAGVTGGSSSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSXXXXXXXXXXXXXXXXXXXXAGTAAAEVEACLIGDEVRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQIPLTLDQSVHAPPPSMHFTGSIHSTRSVTSTLKSAATEKSIEGDD 558
            DVSRDTLVSHADLLLQLGVDPAGLK+RYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFEQ+GAPSTPSASSTPAPPTAT+APPET+QQG QK+GDTATTAVAN QDKKTHAGLISLVQ SVGRFFDLLYAKVDQSLDANSSNPQPRSHAPSEAGAG AGKK        XXXXXXXXXXXXXDLDPVALGGVVAAVQQLVTDIETVDPHVPQ VQLARRAKDFAQEFK GQVRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDIL DA+DTGYPGAAGGGM XXXXXXXXXXXXXXXXXXXXX    EGGRYPALVDRALGTL+KARQTDR T                                                                  DEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASALGIVAGVTGGSSSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSXXXXXXXXX           AGTA     A +  D+VRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQIPLTLDQSVHAP PSMHFTGSIHSTRSVTSTLKSAATEKS+EGDD
Sbjct:  243 DVSRDTLVSHADLLLQLGVDPAGLKERYLDAHRRQLEAFLLASTGALVEDRSVSLDACLGKLAEGFLPMLLRTVQLYDQLFEQTGAPSTPSASSTPAPPTATQAPPETKQQGHQKDGDTATTAVANGQDKKTHAGLISLVQTSVGRFFDLLYAKVDQSLDANSSNPQPRSHAPSEAGAGEAGKKXXXXXXXXXXXXXXXXXXXXXDLDPVALGGVVAAVQQLVTDIETVDPHVPQ-VQLARRAKDFAQEFKSGQVRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDILADALDTGYPGAAGGGMXXXXXXXXXXXXXXXXXXXXXXXXXXEGGRYPALVDRALGTLMKARQTDRQTICLASLYPLAPDLPLKPLPHVASPPPPXXXXXXXXXXXPPPPFWSSPSSSFRFVTRFFVLWCWQRADEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASALGIVAGVTGGSSSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSXXXXXXXXXKAAAEAV----AGTAXXXXXAGVSVDDVRAGASEGEVSLLLACLCRGLETTFVVRVPEILGRQIPLTLDQSVHAPSPSMHFTGSIHSTRSVTSTLKSAATEKSMEGDD 860          
BLAST of mRNA_Ecto-sp13_S_contig8557.19962.1 vs. uniprot
Match: A0A6H5JLT5_9PHAE (Vacuolar protein sorting-associated protein 51 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT5_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 4.990e-54
Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
Query:  611 QVGLEAPPGDAGDWFSVEEPTGVGEAVLDALELAEDNVKEVCAFLGETRSGTVSVTRSGDRDLRRGSSVALLSGTGRNGRGGIGGGGGVRRDIDRIFESSGADGG 715
            +VGLEAPPG AGDWFSVEEPTGVGEAVLDALELAEDNVKEVCAFLGETRSGTVSVTRSGDRDLRRGSSVALLSGTGRNGRGGIGGGGGVRRDIDRIFESS A GG
Sbjct:    7 RVGLEAPPGGAGDWFSVEEPTGVGEAVLDALELAEDNVKEVCAFLGETRSGTVSVTRSGDRDLRRGSSVALLSGTGRNGRGGIGGGGGVRRDIDRIFESSAAGGG 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8557.19962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRL8_ECTSI0.000e+083.96Vacuolar protein sorting-associated protein 51 hom... [more]
A0A6H5JIJ8_9PHAE6.380e-28281.22Vacuolar protein sorting-associated protein 51 hom... [more]
A0A6H5JLT5_9PHAE4.990e-5496.19Vacuolar protein sorting-associated protein 51 hom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8557contigEcto-sp13_S_contig8557:670..6722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8557.19962.1mRNA_Ecto-sp13_S_contig8557.19962.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8557 670..6722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8557.19962.1 ID=prot_Ecto-sp13_S_contig8557.19962.1|Name=mRNA_Ecto-sp13_S_contig8557.19962.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=715bp
DVSRDTLVSHADLLLQLGVDPAGLKDRYLDAHRRQLEAFLLASTGALVED
RSVSLDACLGKLAEGFLPMLLRTVQLYDQLFEQSGAPSTPSASSTPAPPT
ATEAPPETQQQGQQKEGDTATTAVANDQDKKTHAGLISLVQASVGRFFDL
LYAKVDQSLDANSSNPQPRSHAPSEAGAGAAGKKSEGQLQGGGGEVTAAE
GGGGGDLDPVALGGVVAAVQQLVTDIETVDPHVPQQVQLARRAKDFAQEF
KRGQVRRAFRVLCRTSLSVTTSMVNAVRAGTPPEDILTDAVDTGYPGAAG
GGMTGGSGRHGGSSSVSGGGRNRRAGGSGEGGRYPALVDRALGTLLKARQ
TDRLTTDEIVSGLRPLSRLDSSPGPLAEELRFGLWGVVLWLASALGIVAG
VTGGSSSCDSLPPAEGREYNKALEEEWGNRAVSALREPLPSPSPSPSPSP
SPDTKAAPATAAGTAAAEVEACLIGDEVRAGASEGEVSLLLACLCRGLET
TFVVRVPEILGRQIPLTLDQSVHAPPPSMHFTGSIHSTRSVTSTLKSAAT
EKSIEGDDDAAAGAGGGGRGGPVLGRRRQLDAVRNRVSAAARFILEYYAE
TTGRRLADVLQVGLEAPPGDAGDWFSVEEPTGVGEAVLDALELAEDNVKE
VCAFLGETRSGTVSVTRSGDRDLRRGSSVALLSGTGRNGRGGIGGGGGVR
RDIDRIFESSGADGG
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