prot_Ecto-sp13_S_contig85476.19950.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig85476.19950.1
Unique Name	prot_Ecto-sp13_S_contig85476.19950.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	194

Homology

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 7.380e-121
Identity = 177/194 (91.24%), Postives = 183/194 (94.33%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP KY+GGSFPYACK+TDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGENTGSEFR+Y  NSA+KLEYAATNTPQQIG SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDLSGLRVIGA
Sbjct:  408 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGA 601

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.140e-120
Identity = 178/194 (91.75%), Postives = 184/194 (94.85%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRE+SRPGQLVVIDNMGPVNPP KY+GGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGENTGSEFR+Y  NSA+KLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDLSGLRVIGA
Sbjct:  460 KHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGA 653

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 2.470e-120
Identity = 176/194 (90.72%), Postives = 182/194 (93.81%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP KY+GGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGENTGSEFR+   NSA+KLEYAATNTPQQ+G SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDLSGLRVIGA
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDNCKNSAIKLEYAATNTPQQLGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGA 277

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 2.380e-119
Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP KY+GGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGENTGSEFR+Y  NSA+KLEYAATNTPQQIG SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDLSGLRVIGA
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGA 277

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.040e-118
Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP KY+GGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGENTGSEFR+Y  NSA+KLEYAATNTPQQIG SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDLSGLRVIGA
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGA 277

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 1.340e-116
Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP KY+GGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGENTGSEFR+Y  NSA+KLEYAATNTPQQIG SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDLSGLRVIGA
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGA 277

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 365 bits (936), Expect = 4.450e-116
Identity = 178/194 (91.75%), Postives = 183/194 (94.33%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP KY+GGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGENTGSEFR+Y  NSA+KLEYAATNTPQQIG SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDLSGLRVIGA
Sbjct:   84 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGA 277

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5KHY1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHY1_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 1.980e-115
Identity = 167/194 (86.08%), Postives = 173/194 (89.18%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP K +GG FPY CKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGY I+T RC  GGE TGSEFR+Y  NSA+KLEYAATNTPQQ    ERDGQ+LAGVTRCLLKDG  PPSMWGELMLTAA LLNRSPHSALGGATPY+K   KSPDLSGLRVIGA
Sbjct:   32 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKNKGGFFPYECKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYLIETIRCDKGGEKTGSEFRDYCKNSAIKLEYAATNTPQQSAVLERDGQSLAGVTRCLLKDGVFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHKKSPDLSGLRVIGA 225

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 7.760e-115
Identity = 176/194 (90.72%), Postives = 181/194 (93.30%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPP KY+GGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+T RC  GGEN GSEFRNY  NSA+KLEYAATNTPQQIG SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRS HSALGGATPY+K  N+SPDLSGLRVIGA
Sbjct:  425 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGA 618

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BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 8.020e-115
Identity = 175/194 (90.21%), Postives = 179/194 (92.27%), Query Frame = 0

Query:    1 KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSEFRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSMWGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA 194
            KHKQSPHPKQSTRELSR GQLVVIDNMGP NPP KYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRI+  RC  GGENTGSEFR+Y  NSA+KLEYAATNTPQQIG SERDGQTLAGVTRCLLKDGD PPSMWGELMLTAA LLNRSPHSALGGATPY+K  NKSPDL GLRVIGA
Sbjct:  280 KHKQSPHPKQSTRELSRSGQLVVIDNMGPANPPAKYQGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGA 473

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig85476.19950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVF6_9PHAE	7.380e-121	91.24	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KT84_9PHAE	1.140e-120	91.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCM0_9PHAE	2.470e-120	90.72	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5K500_9PHAE	2.380e-119	91.75	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1R7_9PHAE	1.040e-118	91.75	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JJR8_9PHAE	1.340e-116	91.75	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	4.450e-116	91.75	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KHY1_9PHAE	1.980e-115	86.08	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J8P7_9PHAE	7.760e-115	90.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JSL6_9PHAE	8.020e-115	90.21	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 8..189 e-value: 3.4E-17 score: 64.3
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 17..133 e-value: 8.5E-10 score: 38.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 14..183 score: 13.399
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 4..175
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 4..175
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 15..177

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig85476	contig	Ecto-sp13_S_contig85476:1..582 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig85476.19950.1	mRNA_Ecto-sp13_S_contig85476.19950.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig85476 1..582 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig85476.19950.1 ID=prot_Ecto-sp13_S_contig85476.19950.1|Name=mRNA_Ecto-sp13_S_contig85476.19950.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
KHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPGKYQGGSFPYACKITDD
YTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIKTFRCGIGGENTGSE
FRNYGNNSAMKLEYAATNTPQQIGASERDGQTLAGVTRCLLKDGDCPPSM
WGELMLTAANLLNRSPHSALGGATPYAKFPNKSPDLSGLRVIGA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf