prot_Ecto-sp13_S_contig85381.19942.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig85381.19942.1
Unique Nameprot_Ecto-sp13_S_contig85381.19942.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: D7FX35_ECTSI (SKIP_SNW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX35_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 3.670e-41
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query:   16 MAATFLPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            MAATFLPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR
Sbjct:    1 MAATFLPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 70          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A835ZBA7_9STRA (SKIP/SNW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA7_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.040e-23
Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   18 ATFLPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            ATFLPAPRH+Y V  D G     P  PK  +PPYGQRQ FVPR  ADFGDGGA+PE+HVAQ+PL MG+
Sbjct:    2 ATFLPAPRHQYAVRDDRGAIPTAPSRPKPVIPPYGQRQKFVPRTMADFGDGGAYPEVHVAQYPLGMGK 69          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A7S0NQI2_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQI2_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 6.270e-19
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:   16 MAATFLPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            MAA  LP PR+  EV  ++       PAP +K PP G R+ ++PR+QADFGDGGAFPEIHVAQ+PL+MGR
Sbjct:    1 MAALILPQPRNVEEVEVEDAGDGGSAPAPVNKPPPQGARKGWIPRSQADFGDGGAFPEIHVAQYPLDMGR 70          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A8J2S435_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S435_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.040e-18
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   21 LPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMG 84
            LPAP+ +Y V  D   S    P PK + PPYG+R+ FVPR+ ADFGDGGAFPEIHVAQ+PL MG
Sbjct:    8 LPAPQREYVVWQDPDKSLRKAPTPKSRAPPYGRRRGFVPRSIADFGDGGAFPEIHVAQYPLGMG 71          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A7S3ZXS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZXS4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.050e-18
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   21 LPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMG 84
            LPAP+ +Y V  D   S    P PK + PPYG+R+ FVPR+ ADFGDGGAFPEIHVAQ+PL MG
Sbjct:   65 LPAPQREYVVWQDPDKSLRKAPTPKSRAPPYGRRRGFVPRSIADFGDGGAFPEIHVAQYPLGMG 128          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A7S0L1V8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L1V8_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 1.380e-17
Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   16 MAATFLPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            MAA  LP PR+     A++    +   A   K PP G+R+ ++PR+QADFGDGGAFP+IHVAQ+PL+MGR
Sbjct:    3 MAALVLPIPRNMEADEAEDSAPLVSAQATVRKPPPQGKRKGWIPRSQADFGDGGAFPDIHVAQYPLDMGR 72          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A7S4DEU1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEU1_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 4.780e-17
Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   21 LPAPRHKYEVHADEGLSSLLPPA-PKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            LP P++ Y VH DE  + L   A P  + PPYG+R+ FVPR+ ADFGDGGAFPEIHV Q PL MGR
Sbjct:    8 LPNPKNSYVVHQDEAPALLFARAQPGREPPPYGKRKRFVPRSVADFGDGGAFPEIHVVQHPLNMGR 73          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A642V172_9ASCO (Pre-mRNA-processing protein 45 n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642V172_9ASCO)

HSP 1 Score: 83.6 bits (205), Expect = 6.780e-17
Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   18 ATFLPAPRHKYEVHADEG-------LSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            A+ LP P+H+ E   DE        LS  +  A KH +PPYGQRQSF P+ Q D+GDGGA+PEIH+AQ+PL+MGR
Sbjct:    5 ASVLPTPKHREEKRDDERKAQESERLSREV--ALKHTIPPYGQRQSFRPQTQQDYGDGGAYPEIHIAQYPLDMGR 77          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A7S1CN84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN84_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.020e-16
Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 0
Query:   21 LPAPRHKYEVHADEGLSSLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            +PAPR +Y+V+ D+G ++     P  ++PPY  R+ FVPR++ DFGDGGAFPEIHV Q+PL+MGR
Sbjct:    9 IPAPRREYDVY-DDGDATAPAVRPAKRIPPYLHRRGFVPRSKEDFGDGGAFPEIHVKQYPLDMGR 72          
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Match: A0A0S7L5N2_9TELE (SNW domain-containing protein 1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7L5N2_9TELE)

HSP 1 Score: 76.6 bits (187), Expect = 2.920e-16
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    9 VGSWPRTMAATFLPAPRH--KYEVHADEGLS-----SLLPPAPKHKVPPYGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR 85
            VG   +    +FLPAP    + ++ A+E L      S    A + + PPYG R+ +VPR+  DFGDGGAFPEIHVAQFPLEMGR
Sbjct:    1 VGKKGKMSLTSFLPAPTQLSQDQLEAEERLRAQKSHSTALVASRKEPPPYGHRKGWVPRSLEDFGDGGAFPEIHVAQFPLEMGR 84          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85381.19942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX35_ECTSI3.670e-41100.00SKIP_SNW domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZBA7_9STRA1.040e-2366.18SKIP/SNW domain-containing protein n=1 Tax=Tribone... [more]
A0A7S0NQI2_9EUKA6.270e-1958.57Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A8J2S435_9STRA4.040e-1862.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZXS4_9STRA4.050e-1862.50Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A7S0L1V8_9EUKA1.380e-1752.86Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S4DEU1_HETAK4.780e-1760.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A642V172_9ASCO6.780e-1754.67Pre-mRNA-processing protein 45 n=1 Tax=Trichomonas... [more]
A0A7S1CN84_9STRA2.020e-1655.38Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0S7L5N2_9TELE2.920e-1650.00SNW domain-containing protein 1 (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017862SKI-interacting protein, SKIPPANTHERPTHR12096NUCLEAR PROTEIN SKIP-RELATEDcoord: 20..85
NoneNo IPR availablePANTHERPTHR12096:SF0SNW DOMAIN-CONTAINING PROTEIN 1coord: 20..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig85381contigEcto-sp13_S_contig85381:321..575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig85381.19942.1mRNA_Ecto-sp13_S_contig85381.19942.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig85381 321..575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig85381.19942.1 ID=prot_Ecto-sp13_S_contig85381.19942.1|Name=mRNA_Ecto-sp13_S_contig85381.19942.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
PIFRIKQTVGSWPRTMAATFLPAPRHKYEVHADEGLSSLLPPAPKHKVPP
YGQRQSFVPRAQADFGDGGAFPEIHVAQFPLEMGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017862SKI-int_prot_SKIP