prot_Ecto-sp13_S_contig8538.19941.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8538.19941.1
Unique Nameprot_Ecto-sp13_S_contig8538.19941.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length188
Homology
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A6H5KM82_9PHAE (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM82_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 5.600e-114
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0
Query:    1 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXXNNGPGMNNV 187
            MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNV  DGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQG XXXXXXX +NGPG+NNV
Sbjct:  181 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVTADGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGGXXXXXXXSSNGPGINNV 367          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: D7FV24_ECTSI (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV24_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 1.630e-110
Identity = 183/210 (87.14%), Postives = 184/210 (87.62%), Query Frame = 0
Query:    1 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLM-----------------------VGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXXNNGPGMNNV 187
            MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLM                       VGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNAD+KVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXX  G GMNNV
Sbjct:    1 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMRPGGVGGGWVGIETSRVESNAVQVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXXXXGSGMNNV 210          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A7S2V0N0_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0N0_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.990e-58
Identity = 91/156 (58.33%), Postives = 123/156 (78.85%), Query Frame = 0
Query:    8 SSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGG 163
            SS+ V  +++C+L LAFDFWTVKNVSGRL+VGLRWW+NVKEDGTTEW FESLEDM+E++SAD +LFW+G+YG P+ W+ + +  ++ L FQWL+IVV+AL L+GANI GY KC+ D++ K++ MV D  + GAM    + LG+ G+RNALF +  G
Sbjct:   40 SSNFVFIFVLCVLCLAFDFWTVKNVSGRLLVGLRWWNNVKEDGTTEWRFESLEDMTEVSSADSRLFWLGMYGAPLAWLVVFIVDLLKLNFQWLIIVVVALTLNGANIVGYIKCSNDARQKLRFMVEDAGVKGAM----SVLGSAGVRNALFGLLAG 191          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A835Z0U0_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U0_9STRA)

HSP 1 Score: 188 bits (477), Expect = 7.840e-57
Identity = 95/157 (60.51%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    7 VSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGG 163
            +SS+ V+  +  IL+LAFDFWTVKN++GRLMVGLRWWSNVKEDGTT WVFESLE+MSEI  AD KLFWIGLY  P +WV L + G++    QWL+IVV+A+LLS ANI GYTKC+ D+K KV+  + DG MA        A+GN G RN +FS+  G
Sbjct:   80 ISSNFVLICVATILLLAFDFWTVKNITGRLMVGLRWWSNVKEDGTTSWVFESLENMSEIQPADSKLFWIGLYAAPAVWVALFIIGLLKFNLQWLIIVVVAILLSTANIVGYTKCSNDAKNKVRNFMQDGAMA--------AMGNAGFRNMMFSVLTG 228          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A485KG22_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG22_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.690e-50
Identity = 81/144 (56.25%), Postives = 109/144 (75.69%), Query Frame = 0
Query:    7 VSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGN 150
            +S S V  ++IC+L+LAFDFWTVKNVSGRL+VGLRWW+ + EDG+ EWVFESLEDMSEI+  D K+FW GLYG PV+WV  L+  ++ L  +W +I ++AL LSGAN+ GYTKC+ D+K K+Q M    M AGA++   ++ G+
Sbjct:   83 MSDSFVFVFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNEWVFESLEDMSEIDPLDAKIFWTGLYGAPVVWVLFLLIAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKNKMQSM----MTAGALEALNSSAGS 222          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A6V1M0B7_HETAK (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M0B7_HETAK)

HSP 1 Score: 169 bits (428), Expect = 1.760e-49
Identity = 81/156 (51.92%), Postives = 108/156 (69.23%), Query Frame = 0
Query:    8 SSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGG 163
            SS+ +  +++C+L+LA DFWTVKNV+GRL+VGLRWWS+V EDG T+WVFESLED+ E+++ D +LFW+GLY TP  W  L V G++    QWL++VV+AL LSGANI GYTKC  D+K K+Q  V  G+           + + G RN   S F G
Sbjct:   74 SSNFIFLFVLCVLLLAADFWTVKNVTGRLLVGLRWWSHVSEDGKTDWVFESLEDLGEVHAGDARLFWLGLYATPAAWAALFVIGLLKFNLQWLIVVVVALALSGANIIGYTKCRKDAKQKLQGFVESGVTG--------LMASEGFRNTFLSFFTG 221          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A7S3MG51_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MG51_9STRA)

HSP 1 Score: 167 bits (423), Expect = 9.990e-49
Identity = 80/155 (51.61%), Postives = 118/155 (76.13%), Query Frame = 0
Query:    5 KFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFS 159
             +V+++ +  ++ICI++LAFDFWTVKNVSGRL+VGLRWWS VK+DG+ EW+FESLEDM+EI+  D ++FW GLY +P+ W+ LL+ G + L+F++L +V+ AL+L+GANI GY KC++ +K K++ M+  GM     QG+ A L N  +RN + S
Sbjct:   69 SWVTTNFIFVFVICIVLLAFDFWTVKNVSGRLLVGLRWWSYVKDDGSNEWIFESLEDMAEISPVDSRMFWGGLYVSPLCWLFLLIVGFLRLQFEYLPLVIAALMLNGANILGYIKCSSSAKAKMESMMKQGMQ----QGSMAVLENNSVRNWVLS 219          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A024TJ00_9STRA (Golgi apparatus membrane protein TVP23 homolog n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TJ00_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.160e-48
Identity = 79/144 (54.86%), Postives = 106/144 (73.61%), Query Frame = 0
Query:    6 FVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALG 149
            FVS+S V  ++IC+L+LAFDFWTVKNVSGRL+VGLRWW+ + EDG+ +WVFESLEDMSEI+  D K+FW  LYG PV W   L+  ++ L  +W +I ++AL LSGAN+ GYTKC+ D+K K+  M    M AGA++   ++ G
Sbjct:   85 FVSNSFVFIFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNDWVFESLEDMSEIDPLDAKIFWTALYGAPVAWALFLLVAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKSKMHSM----MTAGALEALNSSAG 224          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A812Z9G7_SYMMI (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z9G7_SYMMI)

HSP 1 Score: 163 bits (412), Expect = 6.770e-48
Identity = 80/152 (52.63%), Postives = 115/152 (75.66%), Query Frame = 0
Query:    8 SSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFS 159
            +S+ ++ +++CI++LAFDFWTVKNV+GRL+VGLRWWS V+EDG  EW+FESLEDM+E+++ D +LFW  LY TPV W  LL+ G++ LK ++L IV+ AL+LS ANI GY KC+  ++ KV+ ++ +G+     QG+ AAL N  LRN + S
Sbjct:    7 TSNFIVVFVVCIILLAFDFWTVKNVTGRLLVGLRWWSYVREDGGNEWIFESLEDMAEVSAFDSRLFWGALYVTPVFWTLLLLMGLLRLKIEYLPIVIAALMLSSANIMGYIKCSNSAQAKVRNLMENGIK----QGSMAALENSSLRNWILS 154          
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Match: A0A662XBB3_9STRA (Golgi apparatus membrane protein TVP23 homolog n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBB3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 7.750e-48
Identity = 75/140 (53.57%), Postives = 106/140 (75.71%), Query Frame = 0
Query:    9 SSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAAL 148
            SS V  +++CIL+LAFDFWTVKNV+GRL+VGLRWW+ + EDGT+EWVFES EDM+EI+  D ++FW GLYG+P LW+ LL+  ++    QW +IV++A+ LSGANI GYT+C  D+K K+Q +++ G +      A ++L
Sbjct:   51 SSYVFIFVVCILLLAFDFWTVKNVTGRLLVGLRWWNRINEDGTSEWVFESHEDMTEIDPLDSRVFWTGLYGSPALWMLLLIVAVLKFNVQWALIVLVAVALSGANIIGYTRCKKDAKQKMQSLMSQGALGAFSSSAGSSL 190          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8538.19941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KM82_9PHAE5.600e-11496.79Golgi apparatus membrane protein TVP23 homolog n=1... [more]
D7FV24_ECTSI1.630e-11087.14Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A7S2V0N0_9STRA4.990e-5858.33Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A835Z0U0_9STRA7.840e-5760.51Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A485KG22_9STRA5.690e-5056.25Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A6V1M0B7_HETAK1.760e-4951.92Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A7S3MG51_9STRA9.990e-4951.61Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A024TJ00_9STRA3.160e-4854.86Golgi apparatus membrane protein TVP23 homolog n=9... [more]
A0A812Z9G7_SYMMI6.770e-4852.63Golgi apparatus membrane protein TVP23 homolog n=1... [more]
A0A662XBB3_9STRA7.750e-4853.57Golgi apparatus membrane protein TVP23 homolog n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008564Golgi apparatus membrane protein TVP23-likePFAMPF05832DUF846coord: 5..120
e-value: 8.8E-43
score: 145.7
IPR008564Golgi apparatus membrane protein TVP23-likePANTHERPTHR13019UNCHARACTERIZEDcoord: 5..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..187
NoneNo IPR availableTMHMMTMhelixcoord: 98..117
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 10..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8538contigEcto-sp13_S_contig8538:2698..4794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8538.19941.1mRNA_Ecto-sp13_S_contig8538.19941.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8538 2698..6220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8538.19941.1 ID=prot_Ecto-sp13_S_contig8538.19941.1|Name=mRNA_Ecto-sp13_S_contig8538.19941.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDG
TTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWL
VIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGN
VGLRNALFSMFGGDQAQQGGGRGGASSSNNGPGMNNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008564TVP23-like