prot_Ecto-sp13_S_contig85306.19933.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig85306.19933.1
Unique Nameprot_Ecto-sp13_S_contig85306.19933.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: D7G0K6_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K6_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.070e-24
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            RTQAQA SILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ
Sbjct:   46 RTQAQAASILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 96          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: A0A6H5K9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M4_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.880e-22
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            RTQ QATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ
Sbjct:  424 RTQGQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 474          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: A9V341_MONBE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V341_MONBE)

HSP 1 Score: 59.7 bits (143), Expect = 1.580e-9
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            RT+A+A  I++  R  I    DF+K+A   SDCSSAKRGGDLG FGRG+MQ
Sbjct:   93 RTKAEAIEIIKRHREAIAQGADFAKIAETESDCSSAKRGGDLGAFGRGQMQ 143          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: D2V3Z5_NAEGR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V3Z5_NAEGR)

HSP 1 Score: 58.2 bits (139), Expect = 4.200e-9
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQED----FSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            R++  AT IL+GLR  I + ED    F ++A+  SDCSSAKRGGDLG FGRG+MQ
Sbjct:   86 RSKKDATEILEGLREDIFNAEDMAEKFQELASVHSDCSSAKRGGDLGFFGRGQMQ 140          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: A0A812DEE8_SEPPH (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DEE8_SEPPH)

HSP 1 Score: 57.4 bits (137), Expect = 6.600e-9
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKS-QEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            RT+ +A +IL G R  IKS + DFS +A+  SDCSSAKRGGDLG FG G+MQ
Sbjct:   71 RTKEEAINILSGYRDQIKSGKADFSDLASKYSDCSSAKRGGDLGIFGHGQMQ 122          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: UPI000B8F862F (putative peptidyl-prolyl cis-trans isomerase dodo n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B8F862F)

HSP 1 Score: 57.4 bits (137), Expect = 7.060e-9
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQE-DFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            RT+ +A  IL G R  IKS +  F+++AT  SDCSSAKRGGDLG FGRG MQ
Sbjct:   77 RTKEEALDILAGYRDSIKSGDVSFAELATKYSDCSSAKRGGDLGPFGRGAMQ 128          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: A0A6A4VF94_AMPAM (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VF94_AMPAM)

HSP 1 Score: 57.0 bits (136), Expect = 9.290e-9
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQED-FSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            RT+ +A  ILQG R  I S ED F  +A+  SDCSSAKRGGDLG FGRG MQ
Sbjct:   75 RTKEEALQILQGYRDRIVSGEDTFENLASQFSDCSSAKRGGDLGPFGRGAMQ 126          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: A0A6A6VMC4_9PLEO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6VMC4_9PLEO)

HSP 1 Score: 56.2 bits (134), Expect = 2.500e-8
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            R++A+A  I+QG R  I + E+ S +AT  SDCSSA++GGDLG FG G MQ
Sbjct:   96 RSEAEAEEIIQGYRERIDAGENLSDLATTESDCSSARKGGDLGFFGHGDMQ 146          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: A0A507EGF7_9FUNG (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGF7_9FUNG)

HSP 1 Score: 55.5 bits (132), Expect = 3.240e-8
Identity = 31/52 (59.62%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKSQE-DFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            RT+ +A  I++G R  I S E D   +A   SDCSSAK GGDLGTFGRGKMQ
Sbjct:   68 RTKEEALQIIEGYRQRITSGETDLPTLARTESDCSSAKAGGDLGTFGRGKMQ 119          
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Match: A0A4C1VW40_EUMVA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1VW40_EUMVA)

HSP 1 Score: 55.5 bits (132), Expect = 3.640e-8
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 RTQAQATSILQGLRSGIKS-QEDFSKVATARSDCSSAKRGGDLGTFGRGKMQ 51
            R++ +A  IL+G R  I + Q DF+++A+  SDCSSAKRGGDLG FGRG+MQ
Sbjct:   75 RSKDEALEILKGYRKQIVAKQADFAEIASKYSDCSSAKRGGDLGMFGRGQMQ 126          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig85306.19933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0K6_ECTSI2.070e-2498.04Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A6H5K9M4_9PHAE4.880e-2298.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A9V341_MONBE1.580e-958.82Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monosi... [more]
D2V3Z5_NAEGR4.200e-958.18Peptidyl-prolyl cis-trans isomerase n=1 Tax=Naegle... [more]
A0A812DEE8_SEPPH6.600e-961.54Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sepia ... [more]
UPI000B8F862F7.060e-961.54putative peptidyl-prolyl cis-trans isomerase dodo ... [more]
A0A6A4VF94_AMPAM9.290e-963.46Peptidyl-prolyl cis-trans isomerase n=4 Tax=Amphib... [more]
A0A6A6VMC4_9PLEO2.500e-854.90Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sporor... [more]
A0A507EGF7_9FUNG3.240e-859.62Peptidyl-prolyl cis-trans isomerase n=1 Tax=Powell... [more]
A0A4C1VW40_EUMVA3.640e-857.69Peptidyl-prolyl cis-trans isomerase n=1 Tax=Eumeta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 2..50
e-value: 8.8E-10
score: 39.4
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 1..51
score: 13.293
NoneNo IPR availableGENE3D3.10.50.40coord: 1..51
e-value: 1.0E-14
score: 57.0
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 1..51
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 3..50
IPR023058Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved sitePROSITEPS01096PPIC_PPIASE_1coord: 23..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig85306contigEcto-sp13_S_contig85306:369..521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig85306.19933.1mRNA_Ecto-sp13_S_contig85306.19933.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig85306 369..521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig85306.19933.1 ID=prot_Ecto-sp13_S_contig85306.19933.1|Name=mRNA_Ecto-sp13_S_contig85306.19933.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
RTQAQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKM
Q
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC
IPR023058PPIase_PpiC_CS