prot_Ecto-sp13_S_contig8530.19932.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8530.19932.1
Unique Nameprot_Ecto-sp13_S_contig8530.19932.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8530.19932.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.870e-5
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 0 
Query:    2 TLRLTVDAETPRRLLAANDA-SLNPGERRSTRVPRLRARAVTWSLEGIEG----VIRPPSLQRLTFGRYFDHAVEQV 73
            TL LTVDA TPRRLLAA DA S +P     TRVPRLRAR  TW++    G    +     +  L FG+ F  +++ +
Sbjct:  176 TLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAI 252
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8530.19932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KPY7_9PHAE2.870e-545.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 88..128
e-value: 5.0E-7
score: 29.8
coord: 139..181
e-value: 7.6E-7
score: 29.2
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 54..128
NoneNo IPR availablePANTHERPTHR32134:SF135FNIP REPEAT-CONTAINING PROTEINcoord: 54..185
NoneNo IPR availablePANTHERPTHR32134:SF135FNIP REPEAT-CONTAINING PROTEINcoord: 54..128
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 54..185
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 51..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8530contigEcto-sp13_S_contig8530:1561..2840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8530.19932.1mRNA_Ecto-sp13_S_contig8530.19932.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8530 1420..2840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8530.19932.1 ID=prot_Ecto-sp13_S_contig8530.19932.1|Name=mRNA_Ecto-sp13_S_contig8530.19932.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MTLRLTVDAETPRRLLAANDASLNPGERRSTRVPRLRARAVTWSLEGIEG
VIRPPSLQRLTFGRYFDHAVEQVSWPACLQHLKFGHAFNRPVEGVSWPPS
LHRLIFGRSFNKAIDRIAWPASLQHLAFLGWPGWQPSVFNQPIEGVLWPA
SLQHLSLGSSFHQPVEGVLWPPSLQQLFFGSLFNQAIDRIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP