prot_Ecto-sp13_S_contig852.19919.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig852.19919.1
Unique Nameprot_Ecto-sp13_S_contig852.19919.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length120
Homology
BLAST of mRNA_Ecto-sp13_S_contig852.19919.1 vs. uniprot
Match: A0A6H5K6L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L0_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.950e-55
Identity = 97/119 (81.51%), Postives = 103/119 (86.55%), Query Frame = 0
Query:    1 MNKFITVAFGLALTQQLLTSLTTDTPGAVAAEDAAGFPESFARSCLLAQSSDESEALLSWPAISAGAASAAYLGGLRCAAGGMLNEGTFFLFEVGLKTIINLIILRSLTFLTPSFQGPF 119
            MNK   VAFGLAL Q+LL+SLTTDTPGA  A+DAAGF ES   SCLLAQSSDESEALLSWPA+SAGAASAA LGGL CAAGGML+E T FLFEVGLKTIINLIILRS +FLTP FQGPF
Sbjct:    1 MNKLTMVAFGLALAQKLLSSLTTDTPGAATADDAAGFAESLTWSCLLAQSSDESEALLSWPALSAGAASAACLGGLSCAAGGMLDEATLFLFEVGLKTIINLIILRSPSFLTPRFQGPF 119          
BLAST of mRNA_Ecto-sp13_S_contig852.19919.1 vs. uniprot
Match: D7FU52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU52_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 6.660e-49
Identity = 93/118 (78.81%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 MNKFITVAFGLALTQQLLTSLTTDTPGAVAAEDAAGFPESFARSCLLAQSSDESEALLSWPAISAGAASAAYLGGLRCAAGGMLNEGTFFLFEVGLKTIINLIILRSLTFLTPSFQGP 118
            MN FI VAFG AL QQLL+ LTTDTPGAV+A DAA F ES ARSCLLAQ SD+SEA+L WPAISAGAA A  LG L CAAGGML+EGT FLFEVGLKTIINLIILRSL FL P FQGP
Sbjct:   23 MNNFIVVAFGAALIQQLLSLLTTDTPGAVSAGDAADFAESSARSCLLAQPSDQSEAVLPWPAISAGAARAVCLG-LSCAAGGMLDEGTLFLFEVGLKTIINLIILRSLRFLAPRFQGP 139          
BLAST of mRNA_Ecto-sp13_S_contig852.19919.1 vs. uniprot
Match: A0A6H5JFL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL5_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 4.010e-48
Identity = 87/118 (73.73%), Postives = 98/118 (83.05%), Query Frame = 0
Query:    1 MNKFITVAFGLALTQQLLTSLTTDTPGAVAAEDAAGFPESFARSCLLAQSSDESEALLSWPAISAGAASAAYLGGLRCAAGGMLNEGTFFLFEVGLKTIINLIILRSLTFLTPSFQGP 118
            MN+ I VAFG+A+ QQLL+SLTTDTPGAV+AEDAA F ESFARSCLL Q  D+SEAL+ WPA+SAGAA AA L GL C AGGML++GT FLFEVGLKT INLII+RSL FL   FQGP
Sbjct:    1 MNELIMVAFGVAVIQQLLSSLTTDTPGAVSAEDAADFAESFARSCLLPQPPDQSEALVPWPAVSAGAARAACLVGLSCVAGGMLDKGTLFLFEVGLKTFINLIIIRSLRFLASMFQGP 118          
BLAST of mRNA_Ecto-sp13_S_contig852.19919.1 vs. uniprot
Match: D7G967_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G967_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 3.190e-17
Identity = 56/98 (57.14%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    1 MNKFITVAFGLALTQQLLTSLTT-DTPGAVAAEDAAGFPESFARSCLLAQSSDESEALLSWPAISAGAASAAYLGGLRCAAGGMLNEGTFFLFEVGLK 97
            MNKF+ VA GLA+ Q+   S     T GAV+ E+ AGF E FARSCLLA+SS+ESEALLSWPA+SAGAA AA LG L        N   FF    GLK
Sbjct:    5 MNKFMMVAIGLAVIQRAFFSPAAGSTSGAVSGEELAGFAERFARSCLLARSSEESEALLSWPAVSAGAARAACLGTL------FFNR-VFFFDRFGLK 95          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig852.19919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K6L0_9PHAE7.950e-5581.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU52_ECTSI6.660e-4978.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFL5_9PHAE4.010e-4873.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G967_ECTSI3.190e-1757.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig852contigEcto-sp13_S_contig852:3184..5062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig852.19919.1mRNA_Ecto-sp13_S_contig852.19919.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig852 2621..5091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig852.19919.1 ID=prot_Ecto-sp13_S_contig852.19919.1|Name=mRNA_Ecto-sp13_S_contig852.19919.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp
MNKFITVAFGLALTQQLLTSLTTDTPGAVAAEDAAGFPESFARSCLLAQS
SDESEALLSWPAISAGAASAAYLGGLRCAAGGMLNEGTFFLFEVGLKTII
NLIILRSLTFLTPSFQGPF*
back to top