prot_Ecto-sp13_S_contig8518.19918.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8518.19918.1
Unique Nameprot_Ecto-sp13_S_contig8518.19918.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8518.19918.1 vs. uniprot
Match: D7FKI7_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI7_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.200e-39
Identity = 94/118 (79.66%), Postives = 97/118 (82.20%), Query Frame = 0 
Query:    1 DGGHGEREPRSTSPSRTRRRGGSEGAAAAGLSGENPERRRAGGWIPIDAPGEERRGSDHGXXXXXPSSSVSRRASLSRTTGGIGRGHGGSSS-RSTRGASSRNRSGKDTDAPSWLGRK 117
            DGGH EREPR          GGSEGAAAAGLSGE PERRR+GGWIPIDAPGEERRGSDH XXXXX    VSRRAS S+TTGGIGRGHGGSSS RSTRGASS+NRSG DTD PSWLGRK
Sbjct: 1294 DGGHEEREPR----------GGSEGAAAAGLSGEKPERRRSGGWIPIDAPGEERRGSDHXXXXXXXXXXVSRRASFSKTTGGIGRGHGGSSSSRSTRGASSKNRSGNDTDGPSWLGRK 1401
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8518.19918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKI7_ECTSI1.200e-3979.66Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8518contigEcto-sp13_S_contig8518:701..1054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8518.19918.1mRNA_Ecto-sp13_S_contig8518.19918.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8518 701..1476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8518.19918.1 ID=prot_Ecto-sp13_S_contig8518.19918.1|Name=mRNA_Ecto-sp13_S_contig8518.19918.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
DGGHGEREPRSTSPSRTRRRGGSEGAAAAGLSGENPERRRAGGWIPIDAP
GEERRGSDHGGGGRRPSSSVSRRASLSRTTGGIGRGHGGSSSRSTRGASS
RNRSGKDTDAPSWLGRK*
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