prot_Ecto-sp13_S_contig8516.19916.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8516.19916.1
Unique Nameprot_Ecto-sp13_S_contig8516.19916.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8516.19916.1 vs. uniprot
Match: A0A6H5K3B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B9_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.770e-34
Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 0 
Query:    1 MSGLEPLIPFAWGALRLTSSLLTAGFKKLIDVEDDSNGLIEWSGDVVRNAREKSRLTKQQGKGGGDDAMRVVEQHHQEVR 80
            MSGLEPLIPFAWGALRLTSSLLTAGFKKL+ VED+SNGLIEWSGDVV  AR+KS LTKQQG+G G  AMR  EQH  EVR
Sbjct:    1 MSGLEPLIPFAWGALRLTSSLLTAGFKKLVGVEDESNGLIEWSGDVVLKARDKSLLTKQQGRGDGSAAMRASEQHGHEVR 80
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BLAST of mRNA_Ecto-sp13_S_contig8516.19916.1 vs. uniprot
Match: A0A6H5JUZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ0_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 8.900e-28
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 0 
Query:    1 MSGLEPLIPFAWGALRLTSSLLTAGFKKLIDVEDDSNGLIEWSGDVVRNAREKSRLTKQQGKGGGDDAMRVVEQHHQE 78
            MSGLEP IP AWGALRLT+SL+TAGFKKL+ VED+S+ L+EWSGDVV  AR+ SR T+Q+G    D A R VEQH +E
Sbjct:    1 MSGLEPFIPLAWGALRLTASLVTAGFKKLVGVEDESDALVEWSGDVVLKARDTSRRTQQKG---SDAAARAVEQHREE 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8516.19916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3B9_9PHAE5.770e-3481.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUZ0_9PHAE8.900e-2866.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8516contigEcto-sp13_S_contig8516:4830..5102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8516.19916.1mRNA_Ecto-sp13_S_contig8516.19916.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8516 4763..5206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8516.19916.1 ID=prot_Ecto-sp13_S_contig8516.19916.1|Name=mRNA_Ecto-sp13_S_contig8516.19916.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MSGLEPLIPFAWGALRLTSSLLTAGFKKLIDVEDDSNGLIEWSGDVVRNA
REKSRLTKQQGKGGGDDAMRVVEQHHQEVRVPGLTADMVG*
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