prot_Ecto-sp13_S_contig8514.19913.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8514.19913.1
Unique Nameprot_Ecto-sp13_S_contig8514.19913.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length553
Homology
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: A0A6H5L7V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V8_9PHAE)

HSP 1 Score: 554 bits (1427), Expect = 6.870e-184
Identity = 430/641 (67.08%), Postives = 444/641 (69.27%), Query Frame = 0
Query:   30 AAPAAGITLPLAAGVTLGGTGGSMGKSVVLSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLALAKGEPVPSAPGQGNADGAPATGGSSNSDVGRAAGAVPGSSASQRPSSSDTASSTAASVGGTPCGIAVGGGTEGESAKPGAPGSHENGSAASVPLTAGTKRRRPQDESGGSNGNSADGDHAASTAAAPVDVSSAAGNLREKPGDKLEIAPSTVNDRRGKAEDGRQAAEGDEKGEGDPTAGSASGSRGRASAEGKVRAASQPEPEGTGAPSSAAEGGRADDEETRRANRLKRMRLIS----------------------------------------------------------------------------------------------------------------------RKDRPHSRDSTRSRGPRAEDGGGEGRERERRRGESHRKSRRDKEVGSRQEDXXXXXXXXXXXXXXXRPSGGGARTASGGPSXSDRDRSXXAGDGXXXXXXXXSXXXXXXXXXXRTSAASFRKRESSNSRRERNGRAGGGSRERIREKPRGDRETSGRRSSKDVRKEGERAERSXXXXXXXXXXXXXXXXXXXKRSRRK 552
            AAPAAGI+LPLAAGVT GG GGS+G++ VLSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRV+KRE SNPTFDFLNPANKFHAYYKRQLALAKGEPV  APGQGN  GAPATGGSSNSDVGRAAGAVPGSSASQRPSSS            TPCGIAVGGGTEGESAKPGAP S ENGSAAS  LTAGTKRRRPQDESGGS               APVD SSAAGNLREK GDKL +A STV D+RGKA DGRQAA+GD+KGEGDPT GSASGSRGR SAEGKV AASQPEPEG GAPSSAAEGGRADDEETRRANRLKRMRL+S                                                                                                                      RKDRPHSRDSTRSRGPRAEDGGGEGRERERRRGESHRKS RDKEVGSR+EDXXXXXXXXXXXXXX RPSGGG RTASGGPS SDRDRSXX    XXXXXXXX XXXXXXXXXX               RRER+GR GGGSRER+REKPRGDRETSGRRSSKDVRKEGERAERS    XXXXXXXXXXXXXX KRSRR+
Sbjct:  407 AAPAAGISLPLAAGVTFGGVGGSVGEAAVLSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRVKKREASNPTFDFLNPANKFHAYYKRQLALAKGEPVQPAPGQGNTGGAPATGGSSNSDVGRAAGAVPGSSASQRPSSSXXXXXXXXXXXXTPCGIAVGGGTEGESAKPGAPASQENGSAASGSLTAGTKRRRPQDESGGSXXXXXXXXXXXXXXXAPVDASSAAGNLREKQGDKLRMALSTVKDKRGKAGDGRQAADGDKKGEGDPTPGSASGSRGRLSAEGKVCAASQPEPEGVGAPSSAAEGGRADDEETRRANRLKRMRLMSGHYKLAVLEHSSEQQHESAXXXXXXXXXXXXXXXXXXXXXXXDGDCGGTDDHSSADGLSDLDYTSSSGDEDEGRGRDDEATGSSETAKPAARNSSSSGGTPDRCDRSSRAAGANGXXXRKDRPHSRDSTRSRGPRAEDGGGEGRERERRRGESHRKSGRDKEVGSRREDXXXXXXXXXXXXXXSRPSGGGERTASGGPSRSDRDRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RRERDGRVGGGSRERVREKPRGDRETSGRRSSKDVRKEGERAERSSRRSXXXXXXXXXXXXXXNKRSRRR 1046          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: D7FJ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ62_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 3.230e-179
Identity = 356/512 (69.53%), Postives = 367/512 (71.68%), Query Frame = 0
Query:    1 VGAPNLLGGAYESSXXXXXXXXXXXXXTVAAPA-AGITLPLAAGVTLGGTGGSMGKSVVLSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLALAKGEPVPSAPGQGNADGAPATGGSSNSDVGRAAGAVPGSSASQRPSSSDTASSTAASVGGTPCGIAVGGGTEGESAKPGAPGSHENGSAASVPLTAGTKRRRPQDES--GGSNGNSADGDHAASTAAAPVDVSSAAGNLREKPGDKLEIAPSTVNDRRGKAEDGRQAAEGDEKGEGDPTAGSASGSRGRASAEGKVRAASQPEPEGTGAPSSAAEGGRADDEETRRANRLKRMRLISRKDRPHSRDSTRSRGPRAEDGGGEGRERERRRGESHRKSRRDKEVGSRQEDXXXXXXXXXXXXXXXRPSGGGARTASGGPSXSDRDRSXXAGDGXXXXXXXXSXXXXXXXXXXRTSAASFRKRESSNSRRERNGRAGGGSRERIREKPRGDRETS 509
            VGAPNLLGGAYESS               A  A  G TLPLAAGV+LG  GGS+G+ V+LSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLALAKGEPV  APGQGN  GAPATGGSSNSDV              RP    TA  TAASVGG  CGIAVGGGTEGESAKPGAP   ENGSAASV LTAG KRRRPQDES  GGSNGNSADGD A STAA PVD SSA GNLREK GDKL IA STVNDRRGKA+DGRQ  EGDEKGEGDPT GSASG RGR SAEGKVRAASQPEPEG GAPSSAAEGGRADDEETR           SRKDRPHSRDSTRSR PRAED GG GRERERR GESHRKSRRDK+V SR+ED            XXX        TASGGPS SDRDRS  AGDG        +          RT                 +GRAGG +RER+REKPRGDRETS
Sbjct:  356 VGAPNLLGGAYESSEDEEDNASTAAAVPPATAAPTGTTLPLAAGVSLGEAGGSVGEGVLLSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLALAKGEPVSPAPGQGNTGGAPATGGSSNSDVRXXXXXXXXXXXXXRPXXXYTAXXTAASVGGASCGIAVGGGTEGESAKPGAPADQENGSAASVSLTAGKKRRRPQDESXXGGSNGNSADGDDATSTAAGPVDTSSAEGNLREKLGDKLGIALSTVNDRRGKADDGRQVVEGDEKGEGDPTPGSASGRRGRVSAEGKVRAASQPEPEGAGAPSSAAEGGRADDEETR----------SSRKDRPHSRDSTRSRVPRAEDSGGGGRERERRSGESHRKSRRDKDVASRREDRRDGRRGRSRSNXXXXXXXXXXXTASGGPSRSDRDRSSRAGDGTDWKRSDRNERGDRDKTSSRTXXXXXXXXXXXXXXXXXDGRAGGNNRERVREKPRGDRETS 857          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: Q5BRT7_SCHJA (SJCHGC07410 protein (Fragment) n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=Q5BRT7_SCHJA)

HSP 1 Score: 67.0 bits (162), Expect = 2.320e-10
Identity = 27/54 (50.00%), Postives = 40/54 (74.07%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQL 117
            P  E R +V+K   +VA+NG  FE R+R+ E+SNP F+FLNPA+ +HAYY+ ++
Sbjct:   19 PPPEVRNIVDKTASFVARNGPDFESRIRQNEISNPKFNFLNPADPYHAYYQHKV 72          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: UPI000C758172 (splicing factor 3A subunit 1-like isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C758172)

HSP 1 Score: 69.3 bits (168), Expect = 1.150e-8
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLA-LAKGEP 124
            P  E R +V+K  G+VA+NGQ FE R+++ EV+NP F+FLNP + +HAYY+ ++  + +G+P
Sbjct:   13 PPPEVRNIVDKTAGFVARNGQEFEHRIKQNEVNNPKFNFLNPGDPYHAYYQHKVVQIREGKP 74          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: A0A821SBD0_9NEOB ((mimic poison frog) hypothetical protein (Fragment) n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821SBD0_9NEOB)

HSP 1 Score: 63.5 bits (153), Expect = 1.160e-8
Identity = 25/54 (46.30%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQL 117
            P  E R +V+K   +VA+NG  FE R+R+ E++NP F+FLNP + +HAYY+ ++
Sbjct:   18 PPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKV 71          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: UPI001C4BC296 (splicing factor 3A subunit 1-like n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4BC296)

HSP 1 Score: 63.5 bits (153), Expect = 1.440e-8
Identity = 25/54 (46.30%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQL 117
            P  E R +V+K   +VA+NG  FE R+R+ E++NP F+FLNP + +HAYY+ ++
Sbjct:   42 PPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKV 95          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: A0A183W936_TRIRE (Uncharacterized protein n=1 Tax=Trichobilharzia regenti TaxID=157069 RepID=A0A183W936_TRIRE)

HSP 1 Score: 68.6 bits (166), Expect = 1.700e-8
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLA-LAKGE-PVPSA 128
            P  E R +V+K   +VA+NG  FE R+R+ E+SNP F+FLNPA+ +HAYY+ ++   A+G  P PSA
Sbjct:   23 PPPEVRNIVDKTASFVARNGPDFESRIRQNEISNPKFNFLNPADPYHAYYQHKVREFAEGRTPEPSA 89          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: A0A095A0P3_SCHHA (Splicing factor 3A subunit 1 n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A095A0P3_SCHHA)

HSP 1 Score: 67.4 bits (163), Expect = 3.310e-8
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLA-LAKGE-PVPSA 128
            P  E R +V+K   +VA+NG  FE R+R+ E+SNP F+FLNPA+ +HAYY+ ++   A+G  P P+A
Sbjct:   22 PPPEVRNIVDKTASFVARNGPDFESRIRQNEISNPKFNFLNPADPYHAYYQHKVREFAEGRTPEPAA 88          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: A0A2D4PJB1_MICSU (SURP motif domain-containing protein (Fragment) n=1 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4PJB1_MICSU)

HSP 1 Score: 63.5 bits (153), Expect = 3.630e-8
Identity = 25/54 (46.30%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQL 117
            P  E R +V+K   +VA+NG  FE R+R+ E++NP F+FLNP + +HAYY+ ++
Sbjct:   34 PPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKV 87          
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Match: A0A183PRB4_9TREM (Uncharacterized protein n=12 Tax=Schistosoma TaxID=6181 RepID=A0A183PRB4_9TREM)

HSP 1 Score: 67.4 bits (163), Expect = 4.330e-8
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   64 PGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTFDFLNPANKFHAYYKRQLA-LAKGE-PVPSA 128
            P  E R +V+K   +VA+NG  FE R+R+ E+SNP F+FLNPA+ +HAYY+ ++   A+G  P P+A
Sbjct:   22 PPPEVRNIVDKTASFVARNGPDFESRIRQNEISNPKFNFLNPADPYHAYYQHKVREFAEGRTPEPAA 88          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8514.19913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7V8_9PHAE6.870e-18467.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ62_ECTSI3.230e-17969.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
Q5BRT7_SCHJA2.320e-1050.00SJCHGC07410 protein (Fragment) n=1 Tax=Schistosoma... [more]
UPI000C7581721.150e-846.77splicing factor 3A subunit 1-like isoform X1 n=2 T... [more]
A0A821SBD0_9NEOB1.160e-846.30(mimic poison frog) hypothetical protein (Fragment... [more]
UPI001C4BC2961.440e-846.30splicing factor 3A subunit 1-like n=1 Tax=Scelopor... [more]
A0A183W936_TRIRE1.700e-849.25Uncharacterized protein n=1 Tax=Trichobilharzia re... [more]
A0A095A0P3_SCHHA3.310e-847.76Splicing factor 3A subunit 1 n=1 Tax=Schistosoma h... [more]
A0A2D4PJB1_MICSU3.630e-846.30SURP motif domain-containing protein (Fragment) n=... [more]
A0A183PRB4_9TREM4.330e-847.76Uncharacterized protein n=12 Tax=Schistosoma TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000061SWAP/SurpSMARTSM00648surpneu2coord: 69..122
e-value: 1.0E-16
score: 71.6
IPR000061SWAP/SurpPFAMPF01805Surpcoord: 69..116
e-value: 2.8E-15
score: 56.1
IPR000061SWAP/SurpPROSITEPS50128SURPcoord: 71..113
score: 16.65
IPR035967SWAP/Surp superfamilyGENE3D1.10.10.790coord: 67..122
e-value: 2.6E-17
score: 64.3
IPR035967SWAP/Surp superfamilySUPERFAMILY109905Surp module (SWAP domain)coord: 60..117
NoneNo IPR availablePANTHERPTHR13161:SF15SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOGcoord: 20..443
IPR040397Suppressor of white apricotPANTHERPTHR13161SPLICING FACTOR SUPPRESSOR OF WHITE APRICOTcoord: 20..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8514contigEcto-sp13_S_contig8514:439..3014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8514.19913.1mRNA_Ecto-sp13_S_contig8514.19913.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8514 439..3014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8514.19913.1 ID=prot_Ecto-sp13_S_contig8514.19913.1|Name=mRNA_Ecto-sp13_S_contig8514.19913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=553bp
VGAPNLLGGAYESSDDEEENASTAAAATVAAPAAGITLPLAAGVTLGGTG
GSMGKSVVLSPAVPGEEKRQVVEKMVGYVAKNGQAFEDRVRKREVSNPTF
DFLNPANKFHAYYKRQLALAKGEPVPSAPGQGNADGAPATGGSSNSDVGR
AAGAVPGSSASQRPSSSDTASSTAASVGGTPCGIAVGGGTEGESAKPGAP
GSHENGSAASVPLTAGTKRRRPQDESGGSNGNSADGDHAASTAAAPVDVS
SAAGNLREKPGDKLEIAPSTVNDRRGKAEDGRQAAEGDEKGEGDPTAGSA
SGSRGRASAEGKVRAASQPEPEGTGAPSSAAEGGRADDEETRRANRLKRM
RLISRKDRPHSRDSTRSRGPRAEDGGGEGRERERRRGESHRKSRRDKEVG
SRQEDRRDGRRGRSRSSSRSRPSGGGARTASGGPSRSDRDRSSRAGDGAD
RKRSDRSERGDRDKTSSRTSAASFRKRESSNSRRERNGRAGGGSRERIRE
KPRGDRETSGRRSSKDVRKEGERAERSSRRSRSRDRGESRERGGSNKRSR
RK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000061Surp
IPR035967SWAP/Surp_sf
IPR040397SWAP