prot_Ecto-sp13_S_contig8487.19881.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8487.19881.1
Unique Nameprot_Ecto-sp13_S_contig8487.19881.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 3.230e-13
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0 
Query:    6 QGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLFE 46
            QGKYE+AEPL+RRSL IDE+ Y PDHPNVATGLSNLAGL E
Sbjct:  154 QGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLLE 194
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 5.610e-9
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:    3 FTFQGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSN 40
            F FQGKY++AEPLY+RSL IDE  Y PDHP+VAT L+N
Sbjct:  348 FMFQGKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNN 385
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 9.850e-8
Identity = 28/46 (60.87%), Postives = 31/46 (67.39%), Query Frame = 0 
Query:    1 FLFTFQGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLFE 46
            FLF  QGKY +AEPLY RSL I E    P+HP+VAT L N A L E
Sbjct:  688 FLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 3.400e-6
Identity = 25/45 (55.56%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    2 LFTFQGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLFE 46
            +F     ++ AEPLY RSL IDE  Y PDHP VAT L+N A L+E
Sbjct:  111 VFEILRNFQDAEPLYERSLAIDEKVYGPDHPEVATDLNNWAALYE 155
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: A0A2K2ZIL2_9CHRO (CHAT domain-containing protein n=1 Tax=Euhalothece sp. KZN 001 TaxID=1884791 RepID=A0A2K2ZIL2_9CHRO)

HSP 1 Score: 54.7 bits (130), Expect = 4.030e-6
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:    6 QGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLFE 46
            QGKY +AEPLY ++L + +  Y  DHP+VAT L+NLAGL+E
Sbjct:  239 QGKYSEAEPLYEQALAMRKRLYDGDHPDVATSLNNLAGLYE 279
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: A0A084Y082_9PROT (Photosystem I assembly protein Ycf3 n=1 Tax=Candidatus Accumulibacter sp. SK-01 TaxID=1457154 RepID=A0A084Y082_9PROT)

HSP 1 Score: 54.3 bits (129), Expect = 5.390e-6
Identity = 27/43 (62.79%), Postives = 30/43 (69.77%), Query Frame = 0 
Query:    2 LFTFQGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGL 44
            LF  QG+   AEPL RRSL I E    P+HP VATGL+NLAGL
Sbjct:  166 LFQMQGRTADAEPLNRRSLAIKEKALGPEHPGVATGLNNLAGL 208
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: UPI001E5491FA (tetratricopeptide repeat protein n=1 Tax=Pseudanabaena sp. 'Roaring Creek' TaxID=1681830 RepID=UPI001E5491FA)

HSP 1 Score: 50.1 bits (118), Expect = 8.380e-6
Identity = 19/44 (43.18%), Postives = 34/44 (77.27%), Query Frame = 0 
Query:    2 LFTFQGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLF 45
            ++  QG+Y++AEPLY++++ + ++     HPNVAT ++NLAGL+
Sbjct:    1 MYYSQGRYKEAEPLYKQAIALMQEILGERHPNVATSINNLAGLY 44
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: A0A1I3XVU7_9DELT (Tfp pilus assembly protein PilF (Fragment) n=1 Tax=Desulfomicrobium apsheronum TaxID=52560 RepID=A0A1I3XVU7_9DELT)

HSP 1 Score: 52.8 bits (125), Expect = 1.760e-5
Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:    2 LFTFQGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLF 45
            L+  QG Y +AE LY+RSL I E    PDHP+VAT LSNLA L+
Sbjct:    1 LYDNQGDYAQAESLYKRSLAIREKALGPDHPDVATSLSNLAELY 44
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.430e-5
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 0 
Query:    4 TFQGKYEKAEPLYRRSLVIDEDFYVPDHP 32
             FQGKYE+AEPLY+RSL IDE  Y PDHP
Sbjct:  502 AFQGKYEEAEPLYKRSLAIDEKVYGPDHP 530
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BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Match: A0A7S3NLJ5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLJ5_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.560e-5
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:   10 EKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLFE 46
            ++A+PLY R++ I E  Y P+HP+VATGL+NLAGL E
Sbjct:    1 DEAKPLYERAIEIYEKVYDPNHPHVATGLNNLAGLLE 37
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8487.19881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G180_ECTSI3.230e-1382.93TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KIY6_9PHAE5.610e-971.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI9.850e-860.87NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5LI51_9PHAE3.400e-655.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2K2ZIL2_9CHRO4.030e-658.54CHAT domain-containing protein n=1 Tax=Euhalothece... [more]
A0A084Y082_9PROT5.390e-662.79Photosystem I assembly protein Ycf3 n=1 Tax=Candid... [more]
UPI001E5491FA8.380e-643.18tetratricopeptide repeat protein n=1 Tax=Pseudanab... [more]
A0A1I3XVU7_9DELT1.760e-559.09Tfp pilus assembly protein PilF (Fragment) n=1 Tax... [more]
A0A6H5JLW6_9PHAE2.430e-575.86NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S3NLJ5_9STRA2.560e-559.46Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 8..26
score: 35.26
coord: 73..90
score: 60.0
coord: 117..124
score: 27.62
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 77..110
e-value: 57.0
score: 8.4
coord: 35..68
e-value: 0.08
score: 22.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..124
e-value: 4.3E-45
score: 156.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..122
NoneNo IPR availablePFAMPF13424TPR_12coord: 4..67
e-value: 7.0E-15
score: 55.1
coord: 80..124
e-value: 2.5E-10
score: 40.5
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 62..124
coord: 5..77
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..110
score: 10.642

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8487contigEcto-sp13_S_contig8487:5862..6819 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8487.19881.1mRNA_Ecto-sp13_S_contig8487.19881.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8487 5862..6819 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8487.19881.1 ID=prot_Ecto-sp13_S_contig8487.19881.1|Name=mRNA_Ecto-sp13_S_contig8487.19881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
FLFTFQGKYEKAEPLYRRSLVIDEDFYVPDHPNVATGLSNLAGLFESQGK
HEAAEPLYRRSLAIDEEVYDPDHPEVAADLNNLAGLLETQGKHNEAGPLY
ERSQAIREEVRGPEHPDVATTLNN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom