prot_Ecto-sp13_S_contig84835.19878.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig84835.19878.1
Unique Nameprot_Ecto-sp13_S_contig84835.19878.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length189
Homology
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BLAST of mRNA_Ecto-sp13_S_contig84835.19878.1 vs. uniprot
Match: UPI0000161E52 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E52)

HSP 1 Score: 259 bits (661), Expect = 1.270e-80
Identity = 126/145 (86.90%), Postives = 132/145 (91.03%), Query Frame = 0 
Query:    1 MGTGVQMWHRDGRAKEVLAKTDPSHRGKRTRPEPHPFSAVIAFQENTVLHVVKGSHNRGEENDFSQDAPHEHHITKGYTAVFYSILVHRGMGTEGDCPSENIRGHMYLTVAGCTLPPFGEIEANIKGPEAVATATASTPTLAAAT 145
            MGTGVQMWHRDGRAKEVLAKT PSH+ KRTRPEPHPFSAVIAFQENTVLHVV+GSHNRGEENDFSQDAPH HHI  GY AVFYSILVHRGMGT+GD PSEN+RGHMYLTVAGCTLP FG+IEA+I GPEA ATATAST T AA T
Sbjct:   80 MGTGVQMWHRDGRAKEVLAKTHPSHKDKRTRPEPHPFSAVIAFQENTVLHVVRGSHNRGEENDFSQDAPHAHHIPIGYAAVFYSILVHRGMGTDGDRPSENVRGHMYLTVAGCTLPSFGKIEASINGPEADATATASTHTPAATT 224
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BLAST of mRNA_Ecto-sp13_S_contig84835.19878.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.160e-42
Identity = 79/121 (65.29%), Postives = 90/121 (74.38%), Query Frame = 0 
Query:    1 MGTGVQMWHRDGRAKEVLAKTDPSHRGKRTRPEPHPFSAVIAFQENTVLHVVKGSHNRGEENDFSQDAPHEHHITKGYTAVFYSILVHRGMGTEGDCPSENIRGHMYLTVAGCTLPPFGEI 121
            MGTGVQMWHRDGRAKEVLAKT+PSH+  R RPEPHPFSAVIAF+ENTVLHVV+GSHNRG+ENDFSQDAPH HHIT GY A+   +        EGD P+++  G M    AG  +   G I
Sbjct:  236 MGTGVQMWHRDGRAKEVLAKTNPSHKDNRKRPEPHPFSAVIAFEENTVLHVVRGSHNRGKENDFSQDAPHAHHITIGYAAIPLVL--------EGDAPAQSPMGEMMQYAAGKGVARIGYI 348
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84835.19878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI0000161E521.270e-8086.90hypothetical protein n=1 Tax=Ectocarpus siliculosu... [more]
D8LP46_ECTSI2.160e-4265.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig84835contigEcto-sp13_S_contig84835:6..572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig84835.19878.1mRNA_Ecto-sp13_S_contig84835.19878.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig84835 6..584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig84835.19878.1 ID=prot_Ecto-sp13_S_contig84835.19878.1|Name=mRNA_Ecto-sp13_S_contig84835.19878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp
MGTGVQMWHRDGRAKEVLAKTDPSHRGKRTRPEPHPFSAVIAFQENTVLH
VVKGSHNRGEENDFSQDAPHEHHITKGYTAVFYSILVHRGMGTEGDCPSE
NIRGHMYLTVAGCTLPPFGEIEANIKGPEAVATATASTPTLAAATAATAA
TAADAAQAADLAPAAVAATTAAAAAHEYTDARTGITLEK
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