prot_Ecto-sp13_S_contig84828.19876.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig84828.19876.1
Unique Nameprot_Ecto-sp13_S_contig84828.19876.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp13_S_contig84828.19876.1 vs. uniprot
Match: UPI0004BC1D8A (hypothetical protein n=1 Tax=Bradyrhizobium TaxID=374 RepID=UPI0004BC1D8A)

HSP 1 Score: 55.1 bits (131), Expect = 1.130e-7
Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0 
Query:   21 DKSYEPPTYAEKLFKLIPTEVVALYLVGQTAINQHFPADSPAKDFFTAPWAWSSWTLICL 80
            D++   PTY E L KLIP EVV LYL G+ AI  ++ A   A D  +AP  W  WT++C+
Sbjct:    3 DEARTDPTYQEALTKLIPIEVVTLYLGGKNAIEGYYAAPGNAADG-SAPLWWWGWTIVCI 61
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84828.19876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0004BC1D8A1.130e-746.67hypothetical protein n=1 Tax=Bradyrhizobium TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig84828contigEcto-sp13_S_contig84828:6..245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig84828.19876.1mRNA_Ecto-sp13_S_contig84828.19876.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig84828 6..245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig84828.19876.1 ID=prot_Ecto-sp13_S_contig84828.19876.1|Name=mRNA_Ecto-sp13_S_contig84828.19876.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
MTSAFRIQRVKPSAGALAEEDKSYEPPTYAEKLFKLIPTEVVALYLVGQT
AINQHFPADSPAKDFFTAPWAWSSWTLICL
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