prot_Ecto-sp13_S_contig848.19869.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig848.19869.1
Unique Nameprot_Ecto-sp13_S_contig848.19869.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length541
Homology
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: A0A6H5KK48_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK48_9PHAE)

HSP 1 Score: 943 bits (2438), Expect = 0.000e+0
Identity = 500/531 (94.16%), Postives = 513/531 (96.61%), Query Frame = 0
Query:    1 MARAGVVLLLAGLAWPHDTLPFALGARNTPPYGRCRRRRETRSTSSFIPSATATASHVGNRAAWGLLRSKTTARVRPRARRCSMYSETIRDSPDGERMRSAEVEHQSSLNRTPPPVRRGHGTGLAAGGVGSMKADTIGGLALPLDVGRASRITRVEVDNLAMVDNLSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLDDGGRRLRVNRTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGPEGSADDASLLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEESRGGEEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLDDLVKSVGEKLERSVESLPVLPITLEEVEERTVKWR 531
            MARAGVVL+LAGLAWPHDTLPFALGARNTPPYGRCRRRRET S SSF+PSATATA HVGNRAAWGLLRSK  ARVRPRARRCSMYSE IRDSPDGERMRSAE EHQSSLNRTPPP RRG+G GLAAG VGSM+ DTIGGLALPLD+GRASRITRVEVDNLAMV+N+SIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPL+DGGRRLRV RTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGR+RALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGP GSADDASLLHHWVEELDEFREGEMAFMDRMRS+VE FVDDWGED+LGPLAEPFLSGTLLSD+DAEE  RGG EGLSDLWPRLSRV EGMEDLEASRTKVELARQLAVEQSNP+SIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLDDLVKSVGEKLERSVESLPVLPITLEEVEERTVKWR
Sbjct:    1 MARAGVVLVLAGLAWPHDTLPFALGARNTPPYGRCRRRRETSSMSSFVPSATATALHVGNRAAWGLLRSKIRARVRPRARRCSMYSERIRDSPDGERMRSAESEHQSSLNRTPPPARRGYGNGLAAGSVGSMRVDTIGGLALPLDLGRASRITRVEVDNLAMVENVSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLEDGGRRLRVYRTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRMRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGPGGSADDASLLHHWVEELDEFREGEMAFMDRMRSIVERFVDDWGEDILGPLAEPFLSGTLLSDKDAEEGLRGGVEGLSDLWPRLSRVREGMEDLEASRTKVELARQLAVEQSNPDSIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLDDLVKSVGEKLERSVESLPVLPITLEEVEERTVKWR 531          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: A0A398CC32_9BACL (DNA repair protein RecN n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CC32_9BACL)

HSP 1 Score: 76.6 bits (187), Expect = 4.400e-11
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 0
Query:  152 ITRVEVDNLAMVDNLSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLDDGGRRLRVNRTVGGKG-SSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRALDR 303
            +  + + NLA+++N+S+   RG   +TGETGTGKS++  A +LAAG R   AD++    + A ++   +L+ GH     EVLER G+  D     L V R +  +G SSA +NG +V L  LRE+   L+     +  +   R D  L  LD+
Sbjct:    2 LRELSIRNLAVIENVSVSFHRGFHVLTGETGTGKSIVIDALALAAGGR-GSADMIRHGEAKADIEAVFDLSAGH--PVWEVLERLGIEADSE-ESLLVRRELISQGKSSARINGQNVTLSMLREVGEHLVNIHGQHEHQSLLRTDRHLEWLDQ 150          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: B8C1M4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1M4_THAPS)

HSP 1 Score: 76.6 bits (187), Expect = 5.890e-11
Identity = 113/431 (26.22%), Postives = 182/431 (42.23%), Query Frame = 0
Query:  148 RASRITRVEVDNLAMVDN------LSIKLGRG---LVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEV------LERFGVP----LDDGG---RRLRVNRTV-----GGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFEL-FSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGP---EGSA-------DDASLLHHWVEELDEFREGEMAFMDRMRSVV-ESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEESRGGEEGLSD--LWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLN----SLDDLVKSV---GEKLERSVESLPVLPITLEEVEERTVKW 530
            R+S+I  ++  N+A + N      + +  G      +AVTGE+G+GKSL+ S          +  DLV   G  A   L   L EG     + V      LERFG+      +D      +L + RT+     G   S   +NG  + L +LR + +PL   VD  A     +R   RL  +D      E +L      +    K+A  +R RL+        P   +GS        D   LL HWV+EL++F      F D +     E  +D + E           SG L + ++ ++ + GG     D  L+  +    E ++ +E+       A +     S+PES A A+ K+R LL     +N G   D +E TH+ LN    SL++  +S+      +  ++E +    I++EE++     W
Sbjct:   92 RSSQIVSIKSTNIAGLTNSQGTSDIEVNFGSNGACFIAVTGESGSGKSLLVS----------KAVDLV--TGGKAVATLVPTLGEGGEDERSSVEMISSSLERFGIDPTILSNDQSTMTNQLHLQRTLQWSDTGRLKSICRINGKHISLKSLRHIAAPLFTRVDVGAAATALARPASRLAMIDM---GVEDSLKQNCLEMRESYKRARKKRMRLKSELESRVLPSSMQGSGYTSTSEEDQTELLGHWVDELEKFETRTNLFRDALLGQYNELMMDQYNEH-----DNKKSSGLLNTLQNFKKTTWGGGNASEDNSLFATILEFREEIKAVESQLASAHAAYESLASLSSPESAAVALEKVRKLLYSISRDNSGPLFDSIETTHDLLNEVESSLNECARSIDGDSNSVISTLEQMICNGISIEEIDNIVADW 502          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: A0A7S2PIS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PIS7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.830e-9
Identity = 114/435 (26.21%), Postives = 185/435 (42.53%), Query Frame = 0
Query:  150 SRITRVEVDNLAMVDN------LSIKLGRG--LVAVTGETGTGKSL-ISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGV-PL-----------DDGGRR--------LRVNRTV--GGKGSSASV---NGCSVKLGALRELMSPLIYTVDAN-AFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCR-------FEGGPEGSA---DDASLLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEESRGGEEGLSD--LWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLN----SLDDLVKSV---GEKLERSVESLPVLPITLEEVEERTVKW 530
            S I  V+  N+A + N      + I+ G    LV VTGE+G+GKSL +S A  +  G +     LV  +   + ++L + L E H ++ +  L+ FG+ PL           D G           L + RT+  G  G   S+   N   V L  LRE+ SPL  TVD   A    +RA  RL  LD     +      ++R V    K+A  RR ++++           +G   GS    +   LL HWV+ELD F     A ++R +  +     +   D  GP      S  ++S      E   GE    D  +   L +  E ++ +E+       A +     +  ES A ++ ++R LL     ++ G   + +E THE LN    SL++  +S+      +  ++E+     +++EEV+     W
Sbjct:   82 SHIVSVKSHNIAGIVNDKGNCDIEIEFGSAACLVCVTGESGSGKSLLVSKALDVVTGGKATNT-LVQDQDKESWIELIVRLCEPHLSTVSSTLQHFGIDPLILYHQHTEDTTDVGDHNNEHASVGYLHLQRTLVAGSSGKLKSICRINEKHVSLKTLREIASPLFTTVDVGVASGALARAASRLAMLDIGVEDSLKQQCIQSRDV---FKEATKRRKKIKKELESRILPSSMQGNAYGSELEQEQIELLEHWVDELDMFE----ARVNRFQETIYEQYSELIADGNGP-----GSNNIISTLQKFRECVWGEHNDDDDSILANLLQFREDIKAVESQLIAANAAYEGLASLTATESAAVSLERVRKLLYTISSDDSGPMFEKVERTHELLNIVEESLNECARSIDGGSNSIISTLENARSTGVSMEEVDGLVADW 503          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: A0A6U6F288_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6F288_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.200e-9
Identity = 86/267 (32.21%), Postives = 125/267 (46.82%), Query Frame = 0
Query:  150 SRITRVEVDNLAMVDN----LSIKLGR--GLVAVTGETGTGKSL-ISSAFSLAAGARVRGA-----DLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVP---LDDGGR---------RLRVNRTVG--------GKG---------------SSASVNGCSVKLGALRELMSPLIYTVDANAF-ELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQA-EARRARLEQR---CRFEG-GPEGSADDASLLHHWVEELDEF 363
            S I  ++  NLA +D+    +++ LG    LVAVTGETGTGKSL +  A  +A G +V  +     D      S A V+++L+L++ H   T  ++   G+    L++G R         RL + RT+         G+G               S   VNG  V L ALR + SPL+  VDA+A     S+   RL  +D+  +    A A +AR    Q +Q  EA   + E +       G G E + +   LL HWV+ELDEF
Sbjct:  113 SCIVSIKSRNLAGLDHGEGSVAVDLGSCPSLVAVTGETGTGKSLLVHKALEVAMGGKVSQSIVPSLDTTVGNESNATVEVELKLSQPHLDITRIIMAHHGIDPTLLENGRRSSQKNDTLPRLFLKRTISLQMKPHMQGEGLEKGERIKSPKPRLKSRCEVNGQVVTLKALRAIASPLVTLVDASAAASALSKPTSRLAIIDKGVSTRTKAAAWEAREKYRQARQVREALEMKAESKVLPASLPGYGDETTKEALDLLTHWVDELDEF 379          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: C6JIV8_FUSVA (DNA repair protein RecN n=8 Tax=Fusobacterium TaxID=848 RepID=C6JIV8_FUSVA)

HSP 1 Score: 69.3 bits (168), Expect = 8.960e-9
Identity = 45/152 (29.61%), Postives = 79/152 (51.97%), Query Frame = 0
Query:  152 ITRVEVDNLAMVDNLSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLDDGGRRLRVNRTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRALDR 303
            +  ++++NLA++D L ++ G GL+ +TGETG GKS+I S  +L  G +    D++ S       Q   E+ +       E+  RFG+  +D    +R      GKG  A VN   V L +L+++M  L+  V  ++ ++    +  +R LD+
Sbjct:    2 LRELKIENLAIIDELDLEFGNGLIVLTGETGAGKSIILSGINLLIGEKAS-VDMIRSGEDHLLAQGVFEIND---EQAEELSARFGIETEDNEVIVRRYLDTNGKGK-AFVNNIRVSLSSLKDVMGTLVDIVGQHSHQMLLNKNNHIRLLDK 148          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: UPI00188FA580 (DNA repair protein RecN n=1 Tax=Aliidiomarina indica TaxID=2749147 RepID=UPI00188FA580)

HSP 1 Score: 69.3 bits (168), Expect = 9.050e-9
Identity = 76/250 (30.40%), Postives = 109/250 (43.60%), Query Frame = 0
Query:  152 ITRVEVDNLAMVDNLSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLDD---GGRRLRVNRTVGGKG-SSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGPEGSADDASLLHHWVEELDEF----REGEMAFMDRMRSVVESFVDDWGEDMLGPL 393
            +T++ +   A+VD+L I   +G+ A+TGETG GKS+   A SL  GAR   + +V  R      ++             E LE   + LDD         + RT+  +G S A VNG  V +G L+EL   LI     N   L  + D +++ LD+    A +  A   RS   Q +Q    +  L+QR   E           LL + V ELD+F     E E    D  R    S + D  +  LG L
Sbjct:    2 LTQLNIRQFAIVDHLDIDFQKGMTAITGETGAGKSIALDALSLCLGARSE-SHMV--RPGANKAEITASFCVRQLPHVLEWLEEHDLSLDDVQDNEDSCIIRRTISAEGRSKAFVNGALVPVGTLKELGRMLISLHGQNEHHLLMKTDYQMQLLDQFSNHASLLAAT--RSSFQQWRQLIREQRELQQRVEHENARR------QLLEYQVGELDDFAPSAEEYEQLESDHKRLANASTLVDDAQFSLGTL 240          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: A0A1Z5JGS5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGS5_FISSO)

HSP 1 Score: 69.3 bits (168), Expect = 1.100e-8
Identity = 113/430 (26.28%), Postives = 184/430 (42.79%), Query Frame = 0
Query:  150 SRITRVEVDNLAMV-----DN-LSIKLGRGLVAVTGETGTGKSL-ISSAFSLAAGARVRGADLVGSRGSTAA-----VQLQLELA-EGHRASTAE-VLERFGVPLDDGGRRLRVNRTVGGKG----SSASVNGCSVKLGALRELMSPLIYTVDAN-AFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGPEG---SADDAS--LLHHWVEELDEFREGEMAFMDRMRSVVESFVD-----------DWGEDMLGPLAEPFLSGTLLSDEDAEEESRGGEEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIVKIRGLLIDA---EDENVGLSQDLLEGT---HEDLNSLDDLVKSVGEKLE-------RSVESLPV-LPITLEEVEERTVKW 530
            S IT +   NLA       DN + I    G+ A+TGETG+GKSL ++ A  +  G +   A L+G + S  A     V ++LEL+  GH  + A+  L+   V +   G  L     V  +G    S   +N   V L AL      L+  VDA+ A    S+ + RL  +D   +P  +   ++A+    Q +QA  +R  +E+  +    P     S DD +  L++HW+ EL  F++    F  R+ + +E   +           DW  D  G + E F+                      D+   L       E L A++     AR      S+ +S   AI K R  ++D+    D     ++ L + T   HE LN++++ + +  + +E       R++ESL    P +LEEV+   + W
Sbjct:   50 SYITSIRSQNLAGAQSSRSDNQIVIDFQSGMTAITGETGSGKSLFVARALEVVTGGKGISAALLGGKNSERAKVEEPVVVELELSLRGHYLNAAKSFLKTIEVDVPSTGLILLRRSLVMQQGRRVKSVCHINNQQVTLKALTAFSRSLVTVVDASTAAAALSKPEARLAIIDSAVSPDLLVEVNEAKR---QYRQARRKREAIERELKKRVLPSSFVQSDDDENVELMNHWIRELGVFQDRVELFRGRVATSIEQMTEVHDAILRFAESDWDNDDEGAMYESFMD-------------------FRDMIVSLD------EQLVAAQN----ARDALAALSSDQSAITAIEKTRSFIMDSLGSGDHGKASTRSLQKATERSHELLNAVENALHACSKFIEDDEKGLIRTIESLRENCPFSLEEVDSLLIDW 447          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: A0A2A6E1H0_9BACL (DNA repair protein RecN n=1 Tax=Candidatus Reconcilbacillus cellulovorans TaxID=1906605 RepID=A0A2A6E1H0_9BACL)

HSP 1 Score: 68.9 bits (167), Expect = 1.220e-8
Identity = 58/152 (38.16%), Postives = 77/152 (50.66%), Query Frame = 0
Query:  152 ITRVEVDNLAMVDNLSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLDDGGRRLRVNRTVGGKGSSAS-VNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRALD 302
            +T + + +LA+V+   I   RG VA+TGETG GKS++  A SL AGAR   AD V      A ++   +L E H A   +V  R+G+  D G   L V R +   G S   VNG  V L  LREL   LI     + F+   R +  L  LD
Sbjct:    2 LTELCIRHLAVVEEARICFRRGFVALTGETGAGKSIVVDALSLVAGAR-GSADFVRHGSEKAEIEALFDLEEDHPAR--DVCRRYGLDGDPG-EPLVVRRELTATGKSVCRVNGRLVNLSTLRELGECLINIHGQHEFQSLVRPETHLAWLD 149          
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Match: K0S5J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5J6_THAOC)

HSP 1 Score: 68.6 bits (166), Expect = 1.890e-8
Identity = 80/246 (32.52%), Postives = 120/246 (48.78%), Query Frame = 0
Query:  143 PLDVGRASRITRVEVDNLA-MVDNLSIKL-GRG-LVAVTGETGTGKSL-ISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPL-------DDGGRRLRVNRTV------GGKGSSASVNGCSVKLGALRELMSPLIYTVD-ANAFELFSRADGRLRALDRMFTPAEVAL--ADKARSVVAQLKQAEARRARLEQRCRFEGGPEGSADDAS-----LLHHWVEELDEF 363
            P D+   SR++ ++  N+A +  ++ +   GR  LVAVTGE+GTGKSL +S    LA GA+   + L  S+ + A V   +   E H +S A  LE  G+         +DGG  + + RT+      G   ++ S+NG +V +  LREL + L   VD A A +   R   RL  LDR   P  + +  A+K     A  ++ E+    L+ R        GS DD       ++ HWV+ELD F
Sbjct:   43 PSDIEPFSRLSSIKACNIAGLGPSVEVTFSGRARLVAVTGESGTGKSLLVSKVLGLATGAKFSSSILSTSKPAVAEVSAIIH--EPHLSSFATSLEIHGIDSSEILCVDEDGGCEIHLRRTLIHNERSGRTTTTCSINGRNVSVKTLRELTAHLFTRVDVAVASQALGRPAARLTILDRG-VPEHLLIDCANKRDDYKAAKRKRESIEGELKSRV-LPQNIRGSKDDLDEDQIEMMRHWVDELDSF 284          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig848.19869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK48_9PHAE0.000e+094.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A398CC32_9BACL4.400e-1135.95DNA repair protein RecN n=1 Tax=Cohnella faecalis ... [more]
B8C1M4_THAPS5.890e-1126.22Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2PIS7_9STRA4.830e-926.21Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A6U6F288_9STRA5.200e-932.21Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
C6JIV8_FUSVA8.960e-929.61DNA repair protein RecN n=8 Tax=Fusobacterium TaxI... [more]
UPI00188FA5809.050e-930.40DNA repair protein RecN n=1 Tax=Aliidiomarina indi... [more]
A0A1Z5JGS5_FISSO1.100e-826.28Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A2A6E1H0_9BACL1.220e-838.16DNA repair protein RecN n=1 Tax=Candidatus Reconci... [more]
K0S5J6_THAOC1.890e-832.52Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 316..336
NoneNo IPR availableGENE3D3.40.50.300coord: 151..377
e-value: 1.2E-18
score: 69.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..540
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.65
IPR004604DNA recombination/repair protein RecNPANTHERPTHR11059DNA REPAIR PROTEIN RECNcoord: 126..530
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 150..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig848contigEcto-sp13_S_contig848:203..4991 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig848.19869.1mRNA_Ecto-sp13_S_contig848.19869.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig848 203..4991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig848.19869.1 ID=prot_Ecto-sp13_S_contig848.19869.1|Name=mRNA_Ecto-sp13_S_contig848.19869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=541bp
MARAGVVLLLAGLAWPHDTLPFALGARNTPPYGRCRRRRETRSTSSFIPS
ATATASHVGNRAAWGLLRSKTTARVRPRARRCSMYSETIRDSPDGERMRS
AEVEHQSSLNRTPPPVRRGHGTGLAAGGVGSMKADTIGGLALPLDVGRAS
RITRVEVDNLAMVDNLSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARV
RGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLDDGGRRLRVN
RTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRA
LDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGPEGSADDA
SLLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSG
TLLSDEDAEEESRGGEEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLA
VEQSNPESIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLDDLVK
SVGEKLERSVESLPVLPITLEEVEERTVKWRVRRAMIRGD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004604DNA_recomb/repair_RecN
IPR027417P-loop_NTPase