prot_Ecto-sp13_S_contig84761.19862.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig84761.19862.1
Unique Nameprot_Ecto-sp13_S_contig84761.19862.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
BLAST of mRNA_Ecto-sp13_S_contig84761.19862.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.170e-19
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    2 QFNSPPVGPIGASIQLKEEYKQFRVCIEGHLSRNLNNFVVSCHR 45
            +F+SPPVGPIGASIQLKEEYK FRVCIEGHLSR+LNNFVVSCH+
Sbjct:  536 KFHSPPVGPIGASIQLKEEYKGFRVCIEGHLSRHLNNFVVSCHQ 579          
BLAST of mRNA_Ecto-sp13_S_contig84761.19862.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.340e-17
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    2 QFNSPPVGPIGASIQLKEEYKQFRVCIEGHLSRNLNNFVVSCHR 45
            QF+SPPVGPIGASIQLKEE ++FR CIEGHLSRNLNNFVVSC +
Sbjct:  629 QFSSPPVGPIGASIQLKEECQEFRACIEGHLSRNLNNFVVSCQQ 672          
BLAST of mRNA_Ecto-sp13_S_contig84761.19862.1 vs. uniprot
Match: A0A1G4J4G2_9SACH (LAFA_0D09516g1_1 n=1 Tax=Lachancea sp. CBS 6924 TaxID=433476 RepID=A0A1G4J4G2_9SACH)

HSP 1 Score: 60.8 bits (146), Expect = 1.330e-9
Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 HQFNSPPVGPIGASIQLKEEYKQFRVCIEGHLSRNLNNFVVSC 43
            HQF++PP+GPIGA + +K+EY+++  CI+ +L  NL  FVVSC
Sbjct:  520 HQFSTPPIGPIGAYLTVKKEYREWAKCIQAYLGNNLGAFVVSC 562          
BLAST of mRNA_Ecto-sp13_S_contig84761.19862.1 vs. uniprot
Match: A0A0C7MT04_9SACH (LALA0S01e10682g1_1 n=1 Tax=Lachancea lanzarotensis TaxID=1245769 RepID=A0A0C7MT04_9SACH)

HSP 1 Score: 50.1 bits (118), Expect = 8.570e-6
Identity = 17/42 (40.48%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 HQFNSPPVGPIGASIQLKEEYKQFRVCIEGHLSRNLNNFVVS 42
            H F++PP+GP+GA + +K E++++  CI+ +L  +L  F+VS
Sbjct:  519 HHFSTPPIGPLGAYLTVKAEFREWAKCIQAYLGNSLGAFIVS 560          
BLAST of mRNA_Ecto-sp13_S_contig84761.19862.1 vs. uniprot
Match: A0A1G4JTZ2_9SACH (LAME_0F07294g1_1 n=1 Tax=Lachancea meyersii CBS 8951 TaxID=1266667 RepID=A0A1G4JTZ2_9SACH)

HSP 1 Score: 48.1 bits (113), Expect = 4.110e-5
Identity = 17/41 (41.46%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    2 QFNSPPVGPIGASIQLKEEYKQFRVCIEGHLSRNLNNFVVS 42
            QF+ PP+GP+GA + +K +++++  CI+ +L  NL  FVV+
Sbjct:  519 QFSVPPIGPLGAYVTVKPDFREWTKCIQAYLGNNLGAFVVA 559          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig84761.19862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4M1_ECTSI3.170e-1988.64Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
D7G4M2_ECTSI1.340e-1784.09Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A1G4J4G2_9SACH1.330e-953.49LAFA_0D09516g1_1 n=1 Tax=Lachancea sp. CBS 6924 Ta... [more]
A0A0C7MT04_9SACH8.570e-640.48LALA0S01e10682g1_1 n=1 Tax=Lachancea lanzarotensis... [more]
A0A1G4JTZ2_9SACH4.110e-541.46LAME_0F07294g1_1 n=1 Tax=Lachancea meyersii CBS 89... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig84761contigEcto-sp13_S_contig84761:287..424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig84761.19862.1mRNA_Ecto-sp13_S_contig84761.19862.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig84761 287..424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig84761.19862.1 ID=prot_Ecto-sp13_S_contig84761.19862.1|Name=mRNA_Ecto-sp13_S_contig84761.19862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
HQFNSPPVGPIGASIQLKEEYKQFRVCIEGHLSRNLNNFVVSCHR*
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