prot_Ecto-sp13_S_contig847.19855.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig847.19855.1
Unique Nameprot_Ecto-sp13_S_contig847.19855.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length178
Homology
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BLAST of mRNA_Ecto-sp13_S_contig847.19855.1 vs. uniprot
Match: D8LMS6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS6_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 7.870e-21
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:    1 MGTIFYALIAGRLPFAKQGVQLVRVGTARPEMAPWWHKGYTQVIQDI 47
            MG IFYALIAGRLPF KQGVQLVR+ TARPEMAPWWHKGYTQVIQD+
Sbjct:   99 MGIIFYALIAGRLPFTKQGVQLVRMSTARPEMAPWWHKGYTQVIQDM 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig847.19855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMS6_ECTSI7.870e-2189.36Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig847contigEcto-sp13_S_contig847:18995..20108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig847.19855.1mRNA_Ecto-sp13_S_contig847.19855.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig847 18995..20110 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig847.19855.1 ID=prot_Ecto-sp13_S_contig847.19855.1|Name=mRNA_Ecto-sp13_S_contig847.19855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp
MGTIFYALIAGRLPFAKQGVQLVRVGTARPEMAPWWHKGYTQVIQDICVG
ARPGEEAVCGRSRRALGTHLGRAWCYPKLLAGKPSPRQRALRVISSAEKL
LRAAWVRVVNRNRTWRLLRIFLYQNLASIPHRHLNLNVQQYTRICICIWR
WWCLARVSLQYYATNSSLSIDESSGIN*
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