prot_Ecto-sp13_S_contig8469.19850.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8469.19850.1
Unique Name	prot_Ecto-sp13_S_contig8469.19850.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	291

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8469.19850.1 vs. uniprot
Match: A0A6H5LGR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGR8_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 5.760e-78
Identity = 203/291 (69.76%), Postives = 211/291 (72.51%), Query Frame = 0

Query:    1 MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPEQSMRTAVLRERSNDGAVKAKEMTKASKGPTRTQQMQFAFGSKMVKPSSTGSGRTAGMGSSGAVMPTRGRATTTAHRGGAVAADTGSAVARSRRERAARHDAPDQQPQQRASSRGRGXXXXXXXXXXXXXXXXXXXXXXXXSA-ALKVQLEEKESVIAELRRRLEAKAGRGDSGVKGSSTLXXXXXXXXXXXXXXXXXXXXXGEKAALRAVQEEARADAEEKLSRVEAVTSAGLASLSQMQDRVDEMIRGLKVRRSQ 290
            MST+GGASSK   RSSSTTRSSRRATLGIGSLSPE+ MRTAV RER+NDGAVKAKE TKASKGPTRTQQMQFAFGSK++KPSSTGSG TAGMGSSGAVMPTRGR T                                             XXXXXXXXXXXXXXXXXXXXXXXX   ALKVQLEEKESVIAELRR+LEAKAG GDSGVKG STL                     GE+AALRAVQEEARADAEEKLSRVEAVTSAGLASLS+MQDRVDEMIRGLK RRSQ
Sbjct:    1 MSTVGGASSK---RSSSTTRSSRRATLGIGSLSPERFMRTAVFRERNNDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSSGAVMPTRGRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKVQLEEKESVIAELRRQLEAKAGGGDSGVKGPSTLSSASDTSKQQQQSDELNE---GEQAALRAVQEEARADAEEKLSRVEAVTSAGLASLSEMQDRVDEMIRGLKARRSQ 285

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BLAST of mRNA_Ecto-sp13_S_contig8469.19850.1 vs. uniprot
Match: D7FJP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP6_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.120e-76
Identity = 182/215 (84.65%), Postives = 187/215 (86.98%), Query Frame = 0

Query:    1 MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPEQSMRTAVLRERSNDGAVKAKEMTKASKGPTRTQQMQFAFGSKMVKPSSTGSGRTAGMGSSGAVMPTRGRATTTAHRGGAVAADTGSAVARSRRERAARHDAPDQQPQQRASSRGRGXXXXXXXXXXXXXXXXXXXXXXXXS-AALKVQLEEKESVIAELRRRLEAKAGRGDSGVKGSSTL 214
            MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPE+SMRTAVLRERSNDGAVKAKE TKASKGPTRTQQMQFAFGSK++KPSSTGSG TAGMGS GAVMPTRGR TTTAH GGAVAADTGSA+ARSRRERA  HD                XXXXXXXXXXXXXXXXXXXXXXXX  AALKVQLEEKESVIAELRR+LEAKAG GDSGVK SS L
Sbjct:    1 MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPERSMRTAVLRERSNDGAVKAKETTKASKGPTRTQQMQFAFGSKIIKPSSTGSGSTAGMGSGGAVMPTRGRTTTTAHSGGAVAADTGSALARSRRERAXXHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALKVQLEEKESVIAELRRQLEAKAGGGDSGVKESSAL 215

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8469.19850.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8469.19850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5LGR8_9PHAE	5.760e-78	69.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJP6_ECTSI	1.120e-76	84.65	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..203
None	No IPR available	COILS	Coil	Coil	coord: 242..262

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8469	contig	Ecto-sp13_S_contig8469:274..4126 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8469.19850.1	mRNA_Ecto-sp13_S_contig8469.19850.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8469 274..6858 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8469.19850.1 ID=prot_Ecto-sp13_S_contig8469.19850.1|Name=mRNA_Ecto-sp13_S_contig8469.19850.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
MSTIGGASSKQSQRSSSTTRSSRRATLGIGSLSPEQSMRTAVLRERSNDG
AVKAKEMTKASKGPTRTQQMQFAFGSKMVKPSSTGSGRTAGMGSSGAVMP
TRGRATTTAHRGGAVAADTGSAVARSRRERAARHDAPDQQPQQRASSRGR
GAARAEKQQPLASTTRQESDHHHHASAALKVQLEEKESVIAELRRRLEAK
AGRGDSGVKGSSTLSSASETSKQRQQQQQSDELDEGEKAALRAVQEEARA
DAEEKLSRVEAVTSAGLASLSQMQDRVDEMIRGLKVRRSQ*