prot_Ecto-sp13_S_contig8462.19845.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8462.19845.1
Unique Name	prot_Ecto-sp13_S_contig8462.19845.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	725

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8462.19845.1 vs. uniprot
Match: A0A6H5JH06_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH06_9PHAE)

HSP 1 Score: 464 bits (1195), Expect = 2.640e-143
Identity = 437/606 (72.11%), Postives = 446/606 (73.60%), Query Frame = 0

Query:   95 PAVSPDSESKGGASEVGGSGTAFLPQSPRSSPDAGERSGYAAGTRVMVDARGPESEKAGEAVPVPTAFRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQVSPRSPTTPALPEAIGASAATAXXXXXXXXXXXXXXXXXXXLKKNDESMTTPATAISPTRSNADPRPRSPRQGASADPRVAAKAKQGSTSCLSSPXXXXXXXXXXXXXXXXXXXXPGTVKVEPPASXXSTAASPTAA-AGVKPRDPRRPKPPPYPRPEKPRQQSPIPLFKVEETNVGPVVTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PXXXXXLDPRKRERGIATAVAGAVSGGGEGXXXXXXXXXXAVVESENGGSRKRSRIEYGEAGADQNQINNISNNVLGTENGIGGGVFPPGLPATGHPQAQIVPPGRVGASGVGFVPHQAGVVPDNGGAPVNGPGGMGMGSWTGGGVPQGGVQHPPPAEMTVRSPQAGGLVTQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTQLSPVAVQQQPPAAGWLPSGGPGWQEESAGGITDEIEEG 697
            PAVSPDS+SKGGAS     GT  LP+SPRSSPDAGERSGYAAG+RVMVDARGPESEKAGEAVPVPT FRP  XX                                            RQVSPRSPTTPALPEA+GASAA  XXXXX    XXXXXXXX  LKKNDESMTTPATA SPT SNADPRPRSPRQGA ADPRVA+KAKQ STSCLSSP    XXXXXXXXXXXXXXXX           XX          AG+KPRDPRRPK       EK             ETNV PV     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXX  P     LDPRKRERGIATAV          XXXXXXXXXXAVV     GSRKRSR EYGE GADQNQINN SNNVLG ENGIGG V PPGLPATGHPQAQIV  G VG  G+GFV HQAGVVPDNGGAPVNGPGGMGMGSWTGGGVPQGGVQHPPPA MTV +PQAGGLVTQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQT LSPVAVQQQPPAAGWLPSGGPGWQEESAGG+ DEIEEG
Sbjct:  883 PAVSPDSDSKGGAS-----GTVLLPRSPRSSPDAGERSGYAAGSRVMVDARGPESEKAGEAVPVPTTFRPPPXXPRLASPA-------------------------------------RQVSPRSPTTPALPEAVGASAAXXXXXXXPQLQXXXXXXXXSPLKKNDESMTTPATATSPTTSNADPRPRSPRQGALADPRVASKAKQASTSCLSSPPIGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIKPRDPRRPKXXXXXXXEKXXXXXXXXXXXXXETNVEPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARSXXXXQAPRSPPPLDPRKRERGIATAVX---------XXXXXXXXXXAVVA----GSRKRSRTEYGEGGADQNQINNSSNNVLGAENGIGGSVLPPGLPATGHPQAQIVLSGLVGTGGMGFVTHQAGVVPDNGGAPVNGPGGMGMGSWTGGGVPQGGVQHPPPAGMTVLNPQAGGLVTQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LQTHLSPVAVQQQPPAAGWLPSGGPGWQEESAGGMPDEIEEG 1432

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BLAST of mRNA_Ecto-sp13_S_contig8462.19845.1 vs. uniprot
Match: D7G8X2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X2_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 5.410e-81
Identity = 272/622 (43.73%), Postives = 279/622 (44.86%), Query Frame = 0

Query:   76 LRTDGAVMLPFNGAAAAAAPAVSPDSESKGGASEVGGSGTAFLPQSPRSSPDAGERSGYAAGTRVMVDARGPESEKAGEAVPVPTAFRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQVSPRSPTTPALPEAIGASAATAXXXXXXXXXXXXXXXXXXXLKKNDESMTTPATAISPTRSNADPRPRSPRQGASADPRVAAKAKQGSTSCLSSPXXXXXXXXXXXXXXXXXXXXPGTVKVEPPASXXSTAASPTAAAGVKPRDPRRPKPPPYPRPEKPRQQSPIPLFKVEETNVGPVVTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXLDPRKRERGIATAVAGAVSGGGEGXXXXXXXXXXAVVESENGGSRKRSRIEYGEAGADQNQINNISNNVLGTENGIGGGVFPPGLPATGHPQAQIVPPGRVGASGVGFVPHQAGVVPDNGGAPVNGPGGMGMGSWTGGGVPQGGVQHPPPAEMTVRSPQAGGLVTQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTQLSPVAVQQQPPAAGWLPSGGPGWQEESAGGITDEIEEG 697
            LRTD AVMLPFNGAAAAAAP VSPDSESKG ASEVGGSGT FLP+SPRSSP AGERSGYAAGTRVMVDARGPESEK                                                                                                                                                                                      ++ PP  XX                PR P P                                                                                      LDPRKRERGIATAVAGA  GGGEG          AVVESE GGSRKRSR EYGE G DQNQINN S+NVLG ENG+GGGV PPGLPATGHPQAQIVPPG VG  G+GFVPHQAGVVPDN  APVNGPGGMGMGSWTGGGVPQGGVQHP                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQ QLSPVAVQQQPPAAGWLPS  PGWQEESAGG+ DEIEEG
Sbjct:  867 LRTDRAVMLPFNGAAAAAAPTVSPDSESKGAASEVGGSGTVFLPRSPRSSPAAGERSGYAAGTRVMVDARGPESEK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMSPPXXXXXXXXXXXXXXXXXXEAPRSPPP--------------------------------------------------------------------------------------LDPRKRERGIATAVAGAGIGGGEGAAVVAGGGANAVVESEIGGSRKRSRTEYGEGGTDQNQINNSSSNVLGAENGVGGGVLPPGLPATGHPQAQIVPPGLVGTGGLGFVPHQAGVVPDNASAPVNGPGGMGMGSWTGGGVPQGGVQHPXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALQHQLSPVAVQQQPPAAGWLPSRAPGWQEESAGGMPDEIEEG 1219

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8462.19845.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8462.19845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JH06_9PHAE	2.640e-143	72.11	WW domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
D7G8X2_ECTSI	5.410e-81	43.73	WW domain-containing protein n=1 Tax=Ectocarpus si...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13037	FAMILY NOT NAMED	coord: 393..563

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8462	contig	Ecto-sp13_S_contig8462:4688..6862 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8462.19845.1	mRNA_Ecto-sp13_S_contig8462.19845.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8462 4688..6862 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8462.19845.1 ID=prot_Ecto-sp13_S_contig8462.19845.1|Name=mRNA_Ecto-sp13_S_contig8462.19845.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=725bp
SLPPAAEAHGGGGGGVLTTALPLTSSGGGSLLLPLQGSTPGAAVVSGGVG
DIATAGTQQQQQQQQQQQQQPLPPPLRTDGAVMLPFNGAAAAAAPAVSPD
SESKGGASEVGGSGTAFLPQSPRSSPDAGERSGYAAGTRVMVDARGPESE
KAGEAVPVPTAFRPPPPPPRLASPRSGPEAVPQQQQQQQQQQRQQQEQHG
GQQQRRPPPPPPRQVSPRSPTTPALPEAIGASAATAAASATPQLQPPPQP
PAKPPLKKNDESMTTPATAISPTRSNADPRPRSPRQGASADPRVAAKAKQ
GSTSCLSSPPNGKKKPKPPPPRKKPASSSPGTVKVEPPASPPSTAASPTA
AAGVKPRDPRRPKPPPYPRPEKPRQQSPIPLFKVEETNVGPVVTALPPPP
PPPPPPPPLPPPPPVLSEQRMSPPPVVPAVVAATVARSSPPPQAPRSPPP
LDPRKRERGIATAVAGAVSGGGEGAAVVAGGGANAVVESENGGSRKRSRI
EYGEAGADQNQINNISNNVLGTENGIGGGVFPPGLPATGHPQAQIVPPGR
VGASGVGFVPHQAGVVPDNGGAPVNGPGGMGMGSWTGGGVPQGGVQHPPP
AEMTVRSPQAGGLVTQSPPRPPPPPPPPPPPLPAAIVHGHPAPPGVIMMQ
QGGGALQTQLSPVAVQQQPPAAGWLPSGGPGWQEESAGGITDEIEEGVEE
GGEEEEKEEEEGENDSEEEGEIVL*