prot_Ecto-sp13_S_contig8459.19840.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8459.19840.1
Unique Nameprot_Ecto-sp13_S_contig8459.19840.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: A0A6H5KK48_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK48_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 2.220e-135
Identity = 272/311 (87.46%), Postives = 276/311 (88.75%), Query Frame = 0
Query:    1 MMADVGLEGATFKVLVEESKTLGPSGADRVQFLMEANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKALTDATAVMGSAGTD-IRSISGXXXGSXXXXXXXXXXGACDTLEAAXXXXXXXXXXXXXXXA---------ADGVDEPFTSSARRSRRQGKGRGGVSVSIREVNGREREEELARMAAGDMGGGAAAELAREMLRYSRRQGS 301
            MMADVGLEGATFKVLVEESK LGPSGADRVQFL+EANEGQTRGTVDAVASSGEKSRLLLLLET LPPPQARST +VGDRRG VVGEEG TAE VDADG+AAGTAAGGG GVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKALTD TAVM SAG D IRSISG XX  XXXXXXXXXX         XXXXXXXXXXXXXXX          ADGVDEP +SSARR RRQGKGRGGVSVSIREVNGREREEELARMAAGDMGGGAAAELAREMLRYSRRQGS
Sbjct:  604 MMADVGLEGATFKVLVEESKALGPSGADRVQFLIEANEGQTRGTVDAVASSGEKSRLLLLLETLLPPPQARSTAKVGDRRGVVVGEEGVTAEGVDADGEAAGTAAGGGGGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKALTDTTAVMASAGKDDIRSISGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGVDEPSSSSARRPRRQGKGRGGVSVSIREVNGREREEELARMAAGDMGGGAAAELAREMLRYSRRQGS 914          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: A0A7S3LCQ9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCQ9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 5.550e-17
Identity = 64/163 (39.26%), Postives = 86/163 (52.76%), Query Frame = 0
Query:   17 EESKTLGPSGADRVQFLMEANEGQTR------GTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVP-PCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKAL 172
            + S   G  G D V+F+++     T+      GT+  VASSGEK+R+LL +E  LP              G +    G T   V              SG++  P P  V+YDEIDAHVGGR AVA+G +LA+Q   SQV+ +TH+ +VAA AD H+VV K L
Sbjct:   78 DSSAYSGNLGLDDVEFMLQHGTRTTKEPSRRGGTLHQVASSGEKARILLAIECSLP--------------GSIRAATGSTNTFV--------------SGILPPPIPITVVYDEIDAHVGGRAAVALGHMLADQSLQSQVIAITHSPAVAASADAHIVVQKTL 212          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: A0A1Z5K9M0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9M0_FISSO)

HSP 1 Score: 90.1 bits (222), Expect = 2.060e-16
Identity = 64/172 (37.21%), Postives = 93/172 (54.07%), Query Frame = 0
Query:    5 VGLEGATFKVLVEESKTLGPSGADRVQFLM------EANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDK 170
            VG+E + F   +       P+  D V+FL+      +  +    G ++ +ASSGEK+R+LL +E  LP   A S + V      V  E+   AE                  +V +PP A++YDEIDAHVGGR AVA+G +L  Q + SQV+ +TH+AS+AA AD H+VV +
Sbjct:  542 VGMERSIFTASITPRGDA-PNSDDTVEFLLLHRNADDEKKAADGGRMNEIASSGEKARILLCVECELPGSVAAS-YAVAR----VKKEDETEAE------------------LVGLPPIAIVYDEIDAHVGGRAAVAMGSMLVEQSKWSQVIAITHSASIAAAADSHIVVQR 689          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: UPI001F3E70BC (DNA repair protein RecN n=1 Tax=Antribacter sp. KLBMP9083 TaxID=2910976 RepID=UPI001F3E70BC)

HSP 1 Score: 89.7 bits (221), Expect = 2.530e-16
Identity = 72/168 (42.86%), Postives = 92/168 (54.76%), Query Frame = 0
Query:    5 VGLEGATFKVLVEESKTLGPSGADRVQFLMEANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQA-RSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAG-GGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDK 170
            + + GA   V V+ ++ LGP GAD V FL+  + G     +   AS GE SR++L LE  L    + R+   VG    G+ G   G+   +    DA GTA      G +R      ++DE+DA VGGR AV VGR LA  GR +QVVVVTH A VAA AD HLVV K
Sbjct:  393 LAMGGAHLVVTVDPAEALGPYGADLVTFLLVPHPGAPERPLGKGASGGELSRVMLALEVALATASSTRAASVVGP---GLPGLFDGSGAALVGRTDAPGTAGEQSDDGALRRT---FVFDEVDAGVGGRAAVEVGRRLAALGRSTQVVVVTHLAQVAAFADAHLVVTK 554          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: UPI00177C5FFD (DNA repair protein RecN n=2 Tax=Cellulomonas sp. JH27-2 TaxID=2774139 RepID=UPI00177C5FFD)

HSP 1 Score: 89.0 bits (219), Expect = 4.440e-16
Identity = 70/190 (36.84%), Postives = 94/190 (49.47%), Query Frame = 0
Query:    2 MADVGLEGATFKVLVEESKTLGPSGADRVQFLMEANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKALTDATAVMGSAGTDIRSISG 191
            +A + + GA  +V VE ++ LGP GAD+V+ L+  + G     +   AS GE SR++L LE  L                        T+ D               SG  R  P   ++DE+DA VGG+ AV VGR LA   R SQV+VVTH A VAA AD HLVV K+   A  V     +D+RS++G
Sbjct:  398 LAGLAMSGADLRVQVEPAQALGPHGADQVEMLLVPHAGAPARPLGKGASGGELSRVMLALEVALA-----------------------TSPD---------------SGASR--PGTFVFDEVDAGVGGKAAVEVGRRLAMLARQSQVLVVTHLAQVAAFADHHLVVTKS--QAAGVDVVTDSDVRSVTG 545          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: A0A1Z5JGS5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGS5_FISSO)

HSP 1 Score: 89.0 bits (219), Expect = 5.020e-16
Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 0
Query:    5 VGLEGATFKVLVEESKTLGPSGADRVQFLM------EANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDK 170
            VG+E + F   +       P+  D + FL+      +  +    G ++ +ASSGEK+R+LL +E  LP   A S             E     ++ +A+             +V +PP A++YDEIDAHVGGR AVA+G +L  Q + SQV+ +TH+AS+AA AD H+VV +
Sbjct:  525 VGMERSIFTASITPRGDT-PNSDDTIDFLLLHRYADDEKKAADGGKMNEIASSGEKARILLCVECELPGSVAAS----------YAVERAKKEDETEAE-------------LVGLPPIAIVYDEIDAHVGGRAAVAMGSMLVEQSKWSQVIAITHSASIAAAADSHIVVQR 672          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: A0A413RL32_9CELL (DNA repair protein RecN n=2 Tax=Cellulomonas TaxID=1707 RepID=A0A413RL32_9CELL)

HSP 1 Score: 87.8 bits (216), Expect = 1.090e-15
Identity = 70/189 (37.04%), Postives = 93/189 (49.21%), Query Frame = 0
Query:    2 MADVGLEGATFKVLVEESKTLGPSGADRVQFLMEANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKALTDATAVMGSAGTDIRSIS 190
            +A + + GA  +V V+E+   GP GADRV+ L+  + G     +   AS GE SR++L LE  L                        TA D               SG  R  P   ++DE+DA VGGR AV VGR LA   +DSQV+VVTH A VAA AD HLVV K+      V+  +  D+RS++
Sbjct:  398 LAGLAMGGAELRVAVDEADEPGPHGADRVEMLLVPHAGAPPRPLGKGASGGELSRVMLALEVALA-----------------------TAPD---------------SGASR--PGTFVFDEVDAGVGGRAAVEVGRRLAALAKDSQVLVVTHLAQVAAFADHHLVVTKSSAGGIDVVTES--DVRSVT 544          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: UPI000F7A0397 (DNA repair protein RecN n=1 Tax=Antribacter gilvus TaxID=2304675 RepID=UPI000F7A0397)

HSP 1 Score: 87.8 bits (216), Expect = 1.110e-15
Identity = 67/166 (40.36%), Postives = 88/166 (53.01%), Query Frame = 0
Query:    5 VGLEGATFKVLVEESKTLGPSGADRVQFLMEANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDK 170
            + + GA   V V++++ LGP GAD+V FL+  + G     +   AS GE SR++L LE  L    A +      R+G         A+D        G  A G    +R      ++DE+DA VGGR AV VGR LA  GR +QVVVVTH A VAA AD H+VV K
Sbjct:  393 LAMGGAHLVVTVDDAEALGPFGADQVTFLLVPHPGAPERPLGKGASGGELSRVMLALEVALAT--AANDRSASARQG---------ADD--------GAGAHGDRAALRRT---FVFDEVDAGVGGRAAVEVGRRLATLGRSTQVVVVTHLAQVAAFADAHVVVTK 536          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: B8C1M4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1M4_THAPS)

HSP 1 Score: 87.8 bits (216), Expect = 1.280e-15
Identity = 67/204 (32.84%), Postives = 100/204 (49.02%), Query Frame = 0
Query:    1 MMADVGLEGATFKVLVE------ESKTLGPS--GADRVQFLM---------EANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRD---------------SQVVVVTHTASVAALADQHLVVDKAL 172
            ++  +GLEG +F+V ++      E    G    G D V FL+         + +E Q  G ++ V SSGEKSR+LL +ET LP              G        +A++V  D               +  P  ++YDEIDAHVGGR AV + +LLA+Q R                SQ++ +TH+ASVAA+AD+H+VV++ +
Sbjct:  576 ILPSLGLEGTSFQVQLKQRQGGFEDPYFGADNVGVDLVDFLLLHQKSNTGGQIDESQRGGNIEQVGSSGEKSRVLLAIETALP-----------GSIGSTCNAYSNSADNVQTDSSP------------KAQPICIIYDEIDAHVGGRAAVTMAKLLADQTRKAPDLADIDTATMERGSQIIAITHSASVAAIADKHIVVERTI 756          
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Match: UPI00101287A9 (DNA repair protein RecN n=1 Tax=Cellulomonas endophytica TaxID=2494735 RepID=UPI00101287A9)

HSP 1 Score: 87.0 bits (214), Expect = 1.980e-15
Identity = 69/188 (36.70%), Postives = 90/188 (47.87%), Query Frame = 0
Query:    2 MADVGLEGATFKVLVEESKTLGPSGADRVQFLMEANEGQTRGTVDAVASSGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDAAGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVVVVTHTASVAALADQHLVVDKALTDATAVMGSAGTDIRSI 189
            +A + + GA  +VLVE     GP GADRV+ L+  + G     +   AS GE SR++L LE  L               GG  GE  GT                             ++DE+DA VGGR AV VGR LA+  R SQV+VVTH A VAA AD HLVV K+      V+    +D+R++
Sbjct:  397 LAGLAMAGARLEVLVEPLDEPGPHGADRVEMLLVPHAGAPARPLGKGASGGELSRVMLGLEVALAA------------EGGQRGEAPGT----------------------------FVFDEVDAGVGGRAAVEVGRRLAHLARGSQVLVVTHLAQVAAFADHHLVVTKSRAGGVDVV--TASDVRAV 542          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8459.19840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK48_9PHAE2.220e-13587.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3LCQ9_9STRA5.550e-1739.26Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5K9M0_FISSO2.060e-1637.21Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
UPI001F3E70BC2.530e-1642.86DNA repair protein RecN n=1 Tax=Antribacter sp. KL... [more]
UPI00177C5FFD4.440e-1636.84DNA repair protein RecN n=2 Tax=Cellulomonas sp. J... [more]
A0A1Z5JGS5_FISSO5.020e-1634.88Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A413RL32_9CELL1.090e-1537.04DNA repair protein RecN n=2 Tax=Cellulomonas TaxID... [more]
UPI000F7A03971.110e-1540.36DNA repair protein RecN n=1 Tax=Antribacter gilvus... [more]
B8C1M4_THAPS1.280e-1532.84Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
UPI00101287A91.980e-1536.70DNA repair protein RecN n=1 Tax=Cellulomonas endop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004604DNA recombination/repair protein RecNPANTHERPTHR11059DNA REPAIR PROTEIN RECNcoord: 2..295
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 115..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8459contigEcto-sp13_S_contig8459:4988..6489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8459.19840.1mRNA_Ecto-sp13_S_contig8459.19840.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8459 4364..6525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8459.19840.1 ID=prot_Ecto-sp13_S_contig8459.19840.1|Name=mRNA_Ecto-sp13_S_contig8459.19840.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
MMADVGLEGATFKVLVEESKTLGPSGADRVQFLMEANEGQTRGTVDAVAS
SGEKSRLLLLLETRLPPPQARSTFEVGDRRGGVVGEEGGTAEDVDADGDA
AGTAAGGGSGVVRVPPCAVLYDEIDAHVGGRTAVAVGRLLANQGRDSQVV
VVTHTASVAALADQHLVVDKALTDATAVMGSAGTDIRSISGSSGGSSSGS
RGSGGGGACDTLEAAAASLPPPPTRPPSPPAADGVDEPFTSSARRSRRQG
KGRGGVSVSIREVNGREREEELARMAAGDMGGGAAAELAREMLRYSRRQG
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004604DNA_recomb/repair_RecN
IPR027417P-loop_NTPase