prot_Ecto-sp13_S_contig8459.19838.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8459.19838.1
Unique Nameprot_Ecto-sp13_S_contig8459.19838.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length100
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8459.19838.1 vs. uniprot
Match: D8LCA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA0_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 5.460e-54
Identity = 90/97 (92.78%), Postives = 91/97 (93.81%), Query Frame = 0 
Query:    1 ANVYDEQEEDV---YRDIVENGPDLFSLHGTTLDAPFSFVSESLNLKFQLPSGYLLGKPLKTVVDPDDWGVLTTALLAVLGSNPTSGGKSGNGRDGG 94
            ANVYDEQEEDV   YRDIVENGPDLFSLHGTTLDAPFSFVS+SLNLKFQLPS YLLGKPLKTVVDPDDWGVLTTALLAVLG NPTSGGKSGN RDGG
Sbjct:    2 ANVYDEQEEDVLEVYRDIVENGPDLFSLHGTTLDAPFSFVSKSLNLKFQLPSEYLLGKPLKTVVDPDDWGVLTTALLAVLGPNPTSGGKSGNSRDGG 98
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8459.19838.1 vs. uniprot
Match: A0A6H5KN98_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN98_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 7.640e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:   11 VYRDIVENGPDLFSLHGTTLDAPFSFVSESLNLKFQLPSGYLLGKPLKTVVDPDDWGVLTTALLAVLGSNPTSGGKS 87
            +Y+ +VE GPDLFS H    DAPFSF  E+   + QL     +GKPL ++VDP+D  +L  AL  VL +N T+ G S
Sbjct:   51 LYKALVEEGPDLFSCHRVEPDAPFSFACENYFHQLQLAPEDAVGKPLASIVDPEDAPILAEALNEVL-ANKTNIGDS 126
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8459.19838.1 vs. uniprot
Match: A0A6H5KRF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF4_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-9
Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 0 
Query:   15 IVENGPDLFSLHGTTLDAPFSFVSESLNLKFQLPSGYLLGKPLKTVVDPDDWGVLTTALLAVL 77
            IVE+GPDLFSLH  T+DAPFS++ ++  ++ Q+P   ++G+ L ++VD  +   L  A+  VL
Sbjct:   60 IVEHGPDLFSLHNATIDAPFSYLCDNFTMRLQMPPEAMVGRSLLSIVDEREALSLRNAIFQVL 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8459.19838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCA0_ECTSI5.460e-5492.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN98_9PHAE7.640e-1146.75PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KRF4_9PHAE1.000e-942.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8459contigEcto-sp13_S_contig8459:543..1666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8459.19838.1mRNA_Ecto-sp13_S_contig8459.19838.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8459 543..1666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8459.19838.1 ID=prot_Ecto-sp13_S_contig8459.19838.1|Name=mRNA_Ecto-sp13_S_contig8459.19838.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
ANVYDEQEEDVYRDIVENGPDLFSLHGTTLDAPFSFVSESLNLKFQLPSG
YLLGKPLKTVVDPDDWGVLTTALLAVLGSNPTSGGKSGNGRDGGGGGGIE
back to top