prot_Ecto-sp13_S_contig8457.19836.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8457.19836.1
Unique Nameprot_Ecto-sp13_S_contig8457.19836.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length120
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: D7G154_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G154_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.990e-82
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE 119
            M  +AVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE
Sbjct:    1 MFGQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE 119
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: A0A6H5KW20_9PHAE (UBC core domain-containing protein n=5 Tax=Ochrophyta TaxID=2696291 RepID=A0A6H5KW20_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 3.470e-81
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0 
Query:    4 KAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE 119
            +AVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE
Sbjct:   37 QAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE 152
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: B8CAB3_THAPS (Ubiquitin-conjugating enzyme 1 n=19 Tax=Bacillariophyta TaxID=2836 RepID=B8CAB3_THAPS)

HSP 1 Score: 231 bits (590), Expect = 1.910e-76
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE 119
            ML +AVIFGPDDTPWEGGTFKL+LEF+EDYPNK PSVRFLT+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNPASPANSEASRLY ENRREYNRRVRE+VEQSWVDE
Sbjct:   34 MLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPSVRFLTKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPASPANSEASRLYNENRREYNRRVREIVEQSWVDE 152
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: A0A1Z5KB46_FISSO (Ubiquitin-conjugating enzyme E2 A n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB46_FISSO)

HSP 1 Score: 229 bits (583), Expect = 8.810e-76
Identity = 107/119 (89.92%), Postives = 114/119 (95.80%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE 119
            ML +AVIFGPDDTPWEGGTFKL+LEF+EDYPNK P VRFLT+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNPASPANSEASRLY ENRREYNRRVRE+VEQSW+DE
Sbjct:    6 MLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPQVRFLTKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPASPANSEASRLYNENRREYNRRVREIVEQSWLDE 124
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: A0A4D9CYF5_9STRA (UBC core domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYF5_9STRA)

HSP 1 Score: 224 bits (570), Expect = 5.770e-73
Identity = 103/117 (88.03%), Postives = 113/117 (96.58%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWV 117
            M  +AVIFGPDDTPWEGGTFKLLLEF+EDYPNK P+VRF+T+MFHPNIYN+GQICLDILQNQWSPIYD+ AILTSIQSLLCDPNPASPANSEASRLYQ+NRREYNRRV+EVVEQSW+
Sbjct:   34 MTWQAVIFGPDDTPWEGGTFKLLLEFTEDYPNKAPAVRFVTKMFHPNIYNDGQICLDILQNQWSPIYDVSAILTSIQSLLCDPNPASPANSEASRLYQDNRREYNRRVKEVVEQSWI 150
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: K3WSJ4_GLOUD (UBC core domain-containing protein n=37 Tax=Oomycota TaxID=4762 RepID=K3WSJ4_GLOUD)

HSP 1 Score: 221 bits (563), Expect = 2.490e-72
Identity = 103/117 (88.03%), Postives = 111/117 (94.87%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWV 117
            ML +AVIFGPDDTPWEGGTF L LEFSEDYPNK P+VRF+T+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNP SPANSEA+RL+QENRREYNRRVRE+VEQSWV
Sbjct:   34 MLWQAVIFGPDDTPWEGGTFNLTLEFSEDYPNKAPTVRFITKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPNSPANSEAARLFQENRREYNRRVREIVEQSWV 150
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: F0WM57_9STRA (Ubiquitinconjugating enzyme E2 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM57_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.610e-71
Identity = 101/117 (86.32%), Postives = 111/117 (94.87%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWV 117
            M+ +AVIFGPDDTPWEGGTF L LEFSEDYPNK P+V+F+T+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNP SPANSEA+RL+QENRREYNRRVRE+VEQSWV
Sbjct:   52 MMWQAVIFGPDDTPWEGGTFNLTLEFSEDYPNKAPTVKFITKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPNSPANSEAARLFQENRREYNRRVREIVEQSWV 168
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: A0A7S3GZT1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZT1_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.490e-69
Identity = 98/119 (82.35%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWVDE 119
            M  +AVIFGPDDTPWEGGTFKLLLEF+EDYPNKPP+V+FL+++FHPN+YN+G+ICLDILQNQWSPIYDI AILTSIQSLL DPNPASPAN+EAS+LY  +RREYN+RVREVVEQSW+DE
Sbjct:   34 MAWQAVIFGPDDTPWEGGTFKLLLEFTEDYPNKPPAVKFLSKLFHPNVYNDGKICLDILQNQWSPIYDISAILTSIQSLLSDPNPASPANAEASQLYDRDRREYNKRVREVVEQSWMDE 152
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 n=7 Tax=Pentapetalae TaxID=1437201 RepID=UBC2_MEDSA)

HSP 1 Score: 212 bits (540), Expect = 7.720e-69
Identity = 97/117 (82.91%), Postives = 108/117 (92.31%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWV 117
            ML  AVIFGPDDTPW+GGTFKL L+FSEDYPNKPP+VRF++RMFHPNIY +G ICLDILQNQWSPIYD+ AILTSIQSLLCDPNP SPANSEA+R++ EN+REYNRRVREVVEQSW 
Sbjct:   34 MLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWT 150
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BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Match: I3SRT3_LOTJA (UBC core domain-containing protein n=6 Tax=Mesangiospermae TaxID=1437183 RepID=I3SRT3_LOTJA)

HSP 1 Score: 212 bits (540), Expect = 7.720e-69
Identity = 96/117 (82.05%), Postives = 108/117 (92.31%), Query Frame = 0 
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQENRREYNRRVREVVEQSWV 117
            ML  AVIFGPDDTPW+GGTFKL L+FSEDYPNKPP+VRF++RMFHPNIY +G ICLDILQNQWSPIYD+ AILTSIQSLLCDPNP SPANSEA+R++ EN+REYNRRVRE+VEQSW 
Sbjct:   34 MLWNAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 150
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8457.19836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G154_ECTSI1.990e-8297.48UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KW20_9PHAE3.470e-8199.14UBC core domain-containing protein n=5 Tax=Ochroph... [more]
B8CAB3_THAPS1.910e-7691.60Ubiquitin-conjugating enzyme 1 n=19 Tax=Bacillario... [more]
A0A1Z5KB46_FISSO8.810e-7689.92Ubiquitin-conjugating enzyme E2 A n=1 Tax=Fistulif... [more]
A0A4D9CYF5_9STRA5.770e-7388.03UBC core domain-containing protein n=2 Tax=Monodop... [more]
K3WSJ4_GLOUD2.490e-7288.03UBC core domain-containing protein n=37 Tax=Oomyco... [more]
F0WM57_9STRA2.610e-7186.32Ubiquitinconjugating enzyme E2 putative n=1 Tax=Al... [more]
A0A7S3GZT1_9STRA1.490e-6982.35Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UBC2_MEDSA7.720e-6982.91Ubiquitin-conjugating enzyme E2 2 n=7 Tax=Pentapet... [more]
I3SRT3_LOTJA7.720e-6982.05UBC core domain-containing protein n=6 Tax=Mesangi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 1..117
e-value: 1.8E-43
score: 160.4
NoneNo IPR availablePANTHERPTHR24067:SF293coord: 1..117
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..117
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..119
e-value: 3.0E-55
score: 187.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 4..117
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 4..111
e-value: 4.7E-45
score: 152.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..106
score: 38.923
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 44..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8457contigEcto-sp13_S_contig8457:21..2035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8457.19836.1mRNA_Ecto-sp13_S_contig8457.19836.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8457 21..2035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8457.19836.1 ID=prot_Ecto-sp13_S_contig8457.19836.1|Name=mRNA_Ecto-sp13_S_contig8457.19836.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=120bp
MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYN
NGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSEASRLYQEN
RREYNRRVREVVEQSWVDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS