prot_Ecto-sp13_S_contig8456.19835.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8456.19835.1
Unique Nameprot_Ecto-sp13_S_contig8456.19835.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length489
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8456.19835.1 vs. uniprot
Match: D8LDY0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY0_ECTSI)

HSP 1 Score: 674 bits (1738), Expect = 5.260e-235
Identity = 367/408 (89.95%), Postives = 377/408 (92.40%), Query Frame = 0 
Query:    1 MTSNSTLSNTQAARQPWGPSFEAPVSLARRAVAIGDAKALRRNLEASLGGNGYDVSTTVDGLSGWNYETASELLEHGASTALRDNFGKKAQQMLELSKPVRRRPWSGSSAIPGGSRELSACRRGLPCTSRPRTATGISGGSAHAREAASASSRGQKSVAAAETAAAFRHLHHDRGQIDVGDSLATLPPRSSVAIAKEGSVSALTVVAGAGRDGAATSGLATSPTECWRCHREMAILDADDRHHQRVAGSCTGAASTFPYDARGGLDHSSYFSSSGADNEATVPRGDTAGGGGTYAFPAGIAPRQDQLRRPPSPGAAETLLAEASAFGTLTTDGSPTS--GXXXXXVVGDASHASRGRADVAGRPVSQAAVREEEEK---ANQLLELSFLHVRRHNAGEGEESASENLA 403
            MTSNSTLSNTQAARQPWGPSFEAPV+LARRAVA+GDAKALRRNLEASLGGNGYDVST VDGLSGWNYETASELLEHGASTALRDNFGK AQQMLELSKPVRRRPWSGSSAIPGGSRELSACRRGLPCTSRPRTATGISGGSAHAREA SASSRGQKSVAAAETAAA RHLHHDR QIDVGDSL+TLPPRSSVA AKEGSVSALTVVAGAGRDGA TSGLATSPTECWRCHREMAILDADDRH+QRVAGSCTGAAST PYDARGGLDHSS++SSSGADNEA  PRGDT GGG  YA   G+APRQDQL RPPSPGAAETLLAEAS FGTLTTDGSPTS  GXXXXX   DASHASR RADVAGRPVSQAA++E       ANQLLELSFLHVRRHNAGEGEESAS+NLA
Sbjct:    1 MTSNSTLSNTQAARQPWGPSFEAPVALARRAVALGDAKALRRNLEASLGGNGYDVSTAVDGLSGWNYETASELLEHGASTALRDNFGKMAQQMLELSKPVRRRPWSGSSAIPGGSRELSACRRGLPCTSRPRTATGISGGSAHAREAPSASSRGQKSVAAAETAAADRHLHHDRDQIDVGDSLSTLPPRSSVANAKEGSVSALTVVAGAGRDGAVTSGLATSPTECWRCHREMAILDADDRHNQRVAGSCTGAASTSPYDARGGLDHSSHYSSSGADNEAAGPRGDTTGGGVAYASRTGVAPRQDQLLRPPSPGAAETLLAEASGFGTLTTDGSPTSVGGXXXXXXXXDASHASRDRADVAGRPVSQAALQEXXXXXXXANQLLELSFLHVRRHNAGEGEESASDNLA 408
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BLAST of mRNA_Ecto-sp13_S_contig8456.19835.1 vs. uniprot
Match: A0A6H5L369_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L369_9PHAE)

HSP 1 Score: 622 bits (1604), Expect = 4.860e-205
Identity = 355/506 (70.16%), Postives = 371/506 (73.32%), Query Frame = 0 
Query:   11 QAARQPWGPSFEAPVSLARRAVAIGDAKALRRNLEASLGGNGYDVSTTVDGLSGW--------------------------------------------------------------------------------NYETASELLEHGASTALRDNFGKKAQQMLELSKPVRRRPWSGSSAIPGGSRELSACRRGLPCTSRPRT-----------------------------ATGISGGSAHAREAASASSRGQKSVAAAETAAAFRHLHHDRGQIDVGDSLATLPPRSSVAIAKEGSVSALTVVAGAGRDGAATSGLATSPTECWRCHREMAILDADDRHHQRVAGSCTGAASTFPYDARGGLDHSSYFSSSGADNEATVPRGDTAGGGGTYAFPAGIAPRQDQLRRPPSPGAAETLLAEASAFGTLTTDGSPTSGXXXXXVVGDASHASRGRADVAGRPVSQAAVREEEEK-ANQLLELSFLHVRRHNAGEGEESASENLAAAR 406
            +AARQPWGPSFEAPV+LARRAVA+GDAK+LRRNLEASLGGNGYDVST VDGLSGW                                                                                N+ETASELLE GAS+ALRDNFGK AQQMLELSKPVRRRPW+GSSAIPGGSRELSACRRGLPCTSRPRT                             ATGI GGSAHAREAASASSRGQKSVAAAETAAA RHLHHDRGQIDVGDSL+TLPPRSSVA AKEGS SALTVVAGA RDGA TSGLATSPTECWRCHREMAILDADDRHHQRVAGS TGAAST PYDARGGLDH+SY+SSSGADNEA  PRGDTAGGG TYA   G+APRQDQLRRPPSPG AETLLAEASAFGT+TTDGSPTSG     V GDASHA RGRADVAGRPVSQAAV+EEEE+ ANQ+LELSFLHVRRHNAGEG+ESASENLAAAR
Sbjct:   31 EAARQPWGPSFEAPVTLARRAVALGDAKSLRRNLEASLGGNGYDVSTAVDGLSGWRFSLLHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGKVVVRALVAAGAEVDKANHRGRTALHIAYLSRNHETASELLERGASSALRDNFGKTAQQMLELSKPVRRRPWTGSSAIPGGSRELSACRRGLPCTSRPRTGAMHTGSSGLIPQFVPLLPPTALWLRAYTATGICGGSAHAREAASASSRGQKSVAAAETAAADRHLHHDRGQIDVGDSLSTLPPRSSVANAKEGSASALTVVAGAERDGAGTSGLATSPTECWRCHREMAILDADDRHHQRVAGSYTGAASTSPYDARGGLDHNSYYSSSGADNEAAGPRGDTAGGGVTYASRTGVAPRQDQLRRPPSPGVAETLLAEASAFGTMTTDGSPTSGGGGGGVDGDASHAPRGRADVAGRPVSQAAVQEEEEEEANQILELSFLHVRRHNAGEGKESASENLAAAR 536
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8456.19835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDY0_ECTSI5.260e-23589.95Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5L369_9PHAE4.860e-20570.16Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8456contigEcto-sp13_S_contig8456:1143..6090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8456.19835.1mRNA_Ecto-sp13_S_contig8456.19835.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8456 1143..6090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8456.19835.1 ID=prot_Ecto-sp13_S_contig8456.19835.1|Name=mRNA_Ecto-sp13_S_contig8456.19835.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=489bp
MTSNSTLSNTQAARQPWGPSFEAPVSLARRAVAIGDAKALRRNLEASLGG
NGYDVSTTVDGLSGWNYETASELLEHGASTALRDNFGKKAQQMLELSKPV
RRRPWSGSSAIPGGSRELSACRRGLPCTSRPRTATGISGGSAHAREAASA
SSRGQKSVAAAETAAAFRHLHHDRGQIDVGDSLATLPPRSSVAIAKEGSV
SALTVVAGAGRDGAATSGLATSPTECWRCHREMAILDADDRHHQRVAGSC
TGAASTFPYDARGGLDHSSYFSSSGADNEATVPRGDTAGGGGTYAFPAGI
APRQDQLRRPPSPGAAETLLAEASAFGTLTTDGSPTSGGGGGGVVGDASH
ASRGRADVAGRPVSQAAVREEEEKANQLLELSFLHVRRHNAGEGEESASE
NLAAARERSSRGGGGGRRHGGEGGRISGRSPNRRSRRHAGKRGSRRRGTT
GAAGGRAIKKNGRPGGGGGGGGGASATGQQRRFFFPGDE
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