prot_Ecto-sp13_S_contig845.19830.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig845.19830.1
Unique Nameprot_Ecto-sp13_S_contig845.19830.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length48
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig845.19830.1 vs. uniprot
Match: D7FMM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM5_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.020e-10
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:    1 MKLEGNYLFIGLLSSRRKLAPGSFTPIHWSAQF 33
            MKLEG+Y  IGLLSSRRK  PGSFTP+HWSA F
Sbjct:    1 MKLEGDYFLIGLLSSRRKPDPGSFTPLHWSAHF 33
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig845.19830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMM5_ECTSI1.020e-1078.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig845contigEcto-sp13_S_contig845:18186..19288 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig845.19830.1mRNA_Ecto-sp13_S_contig845.19830.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig845 18186..19304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig845.19830.1 ID=prot_Ecto-sp13_S_contig845.19830.1|Name=mRNA_Ecto-sp13_S_contig845.19830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bp
MKLEGNYLFIGLLSSRRKLAPGSFTPIHWSAQFRAKGSRRDTPRRWR*
back to top