prot_Ecto-sp13_S_contig8419.19793.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8419.19793.1
Unique Nameprot_Ecto-sp13_S_contig8419.19793.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length366
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8419.19793.1 vs. uniprot
Match: A0A6H5L7W1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W1_9PHAE)

HSP 1 Score: 585 bits (1508), Expect = 2.840e-207
Identity = 330/371 (88.95%), Postives = 337/371 (90.84%), Query Frame = 0 
Query:    1 MARSGAIRSDGSXXXXXXXXXXXXXXXCAGRPAAGRRR-----SCRCFSSTLGPMASTAVTLLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGGLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTTVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDDGCSLAAYYIEIDTESGDADRIFGTTCQATNGVLLYEGFTGVGDSTFSDTEVIGDDEETTXXXXXXXXXXXIAXXTTDDAEAVVNGTGGARTRSRALSTTSFDVTACVEFPKN 366
            MARSGAIRSDGSXXXXXXXXXXXXXXX                SCR  SSTL PMAS+AV LLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGGLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAF+NSGPVGQGYLEESAELSSTTVDPEYITAQFTNTGT+TASAQVVMFSTEYPAPN+DEAIDRVVAE+EQEGNIFTVDAEFQADGTEDENFCAGDDGCSLAAYYIEIDTESGDADRIFGTTCQA+NGVLLYEGFTGVGDSTFSDTEVI DDEETT           IA  TTDDAEAV+NGTGGARTRSRALSTTSFDVTACVEFPKN
Sbjct:    1 MARSGAIRSDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCRRISSTLRPMASSAVALLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGGLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFRNSGPVGQGYLEESAELSSTTVDPEYITAQFTNTGTITASAQVVMFSTEYPAPNADEAIDRVVAEYEQEGNIFTVDAEFQADGTEDENFCAGDDGCSLAAYYIEIDTESGDADRIFGTTCQASNGVLLYEGFTGVGDSTFSDTEVIDDDEETTATDEVGVTDDEIAETTTDDAEAVLNGTGGARTRSRALSTTSFDVTACVEFPKN 371
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BLAST of mRNA_Ecto-sp13_S_contig8419.19793.1 vs. uniprot
Match: D8LQ00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ00_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 4.520e-169
Identity = 253/275 (92.00%), Postives = 256/275 (93.09%), Query Frame = 0 
Query:   92 MSFEGGLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTTVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDDGCSLAAYYIEIDTESGDADRIFGTTCQATNGVLLYEGFTGVGDSTFSDTEVIGDDEETTXXXXXXXXXXXIAXXTTDDAEAVVNGTGGARTRSRALSTTSFDVTACVEFPKN 366
            MSFEG LATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSST VDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGD+GCSLAAYYIEIDTES DADRIFGTTCQATNGVLLYEGFTGVGDSTFSDTEVIGDD ETT           IA  TTDD EAV+NG GGARTRSRALSTTSFDV+ACVEFPKN
Sbjct:    1 MSFEGSLATAVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDSAIFYDNLCAFQNSGPVGQGYLEESAELSSTNVDPEYITAQFTNTGTVTASAQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFCAGDNGCSLAAYYIEIDTESDDADRIFGTTCQATNGVLLYEGFTGVGDSTFSDTEVIGDDGETTATDEVGVTDDEIAETTTDDTEAVLNGAGGARTRSRALSTTSFDVSACVEFPKN 275
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8419.19793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7W1_9PHAE2.840e-20788.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ00_ECTSI4.520e-16992.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..366
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..28
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8419contigEcto-sp13_S_contig8419:217..6193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8419.19793.1mRNA_Ecto-sp13_S_contig8419.19793.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8419 217..6193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8419.19793.1 ID=prot_Ecto-sp13_S_contig8419.19793.1|Name=mRNA_Ecto-sp13_S_contig8419.19793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=366bp
MARSGAIRSDGSSSSSTTAAAVAAAASCAGRPAAGRRRSCRCFSSTLGPM
ASTAVTLLLALLSRNPRGADAQGFEYGDPIDVVVTAGDTLAMSFEGGLAT
AVAVSFQQCSGDVYMDMDVSFNGTSLVTSTAVETSKCVRVVGQSASADDS
AIFYDNLCAFQNSGPVGQGYLEESAELSSTTVDPEYITAQFTNTGTVTAS
AQVVMFSTEYPAPNSDEAIDRVVAEFEQEGNIFTVDAEFQADGTEDENFC
AGDDGCSLAAYYIEIDTESGDADRIFGTTCQATNGVLLYEGFTGVGDSTF
SDTEVIGDDEETTATDEEGVTDDEIAETTTDDAEAVVNGTGGARTRSRAL
STTSFDVTACVEFPKN
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