prot_Ecto-sp13_S_contig8326.19686.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8326.19686.1
Unique Nameprot_Ecto-sp13_S_contig8326.19686.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8326.19686.1 vs. uniprot
Match: D7FTJ0_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ0_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 9.220e-53
Identity = 83/87 (95.40%), Postives = 83/87 (95.40%), Query Frame = 0 
Query:    1 MAWGAVLTQWYVAAATAYTILSLALGQELDEPYTDADEDRLKSFWDTRVEVDPCCDVILGEPLEITVWFRTDGNFTESVALYVDLPR 87
            MAWGAVLTQWYV AATAY IL LALGQELDEPYTDADEDRLKSFWDTRVEVDPCCDVILGEPLEITVWFRTDGNFTES ALYVDLPR
Sbjct:    1 MAWGAVLTQWYVTAATAYCILLLALGQELDEPYTDADEDRLKSFWDTRVEVDPCCDVILGEPLEITVWFRTDGNFTESAALYVDLPR 87
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8326.19686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTJ0_ECTSI9.220e-5395.40EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.663

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8326contigEcto-sp13_S_contig8326:4834..5746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8326.19686.1mRNA_Ecto-sp13_S_contig8326.19686.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8326 4834..5751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8326.19686.1 ID=prot_Ecto-sp13_S_contig8326.19686.1|Name=mRNA_Ecto-sp13_S_contig8326.19686.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MAWGAVLTQWYVAAATAYTILSLALGQELDEPYTDADEDRLKSFWDTRVE
VDPCCDVILGEPLEITVWFRTDGNFTESVALYVDLPRECIE*
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