prot_Ecto-sp13_S_contig8281.19626.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8281.19626.1
Unique Nameprot_Ecto-sp13_S_contig8281.19626.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5JD24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD24_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.150e-17
Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKARNQLEY 52
            +DRLGKTFLSHLWQ RK+RLAIGDRSC N APSSRGRV N LTAKA   LEY
Sbjct:  472 IDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTLEY 523          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.660e-17
Identity = 45/68 (66.18%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKARNQLEYDPPPDRQHAIRATAFP 68
            +DRLGKTFLSHLWQ RK+RLAIGDRSC N APSSRGRV N LTAKA       PP    H    T FP
Sbjct:  399 IDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTQRVRPP----HPPHRTFFP 462          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5JMW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW7_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 7.360e-17
Identity = 45/68 (66.18%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    3 RLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKARNQLEYDPPPDRQHAIRATAFPDG 70
            RLGKTFLSHLWQ RK+RLAIGDR C N APSSRGRV N LTAKA    EY PP         T FP G
Sbjct:  348 RLGKTFLSHLWQSRKERLAIGDRCCGNNAPSSRGRVVNGLTAKACKTEEYVPP---------TIFPTG 406          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5KJX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX4_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 9.420e-17
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKA 46
            +DRLGKTFLSHLWQ RK+RLA GDRSC N APSSRGRV N LTAKA
Sbjct:  122 IDRLGKTFLSHLWQSRKERLAFGDRSCGNNAPSSRGRVVNGLTAKA 167          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5JE77_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE77_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.020e-16
Identity = 41/52 (78.85%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKARNQLEY 52
            +DRLGKTFLSHLWQ RK+RLAIGDRSC N APSSRGRV N LTAKA    EY
Sbjct:  649 IDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTPEY 700          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5L729_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L729_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.780e-16
Identity = 41/54 (75.93%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKARNQLEYDP 54
            +DRLGKTFLSHLWQ RK+RLAI DRSC N APSSR RV NDLTAKA    EY P
Sbjct:  270 IDRLGKTFLSHLWQSRKERLAIRDRSCGNNAPSSRARVVNDLTAKACKTEEYVP 323          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5JCQ0_9PHAE (Uncharacterized protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCQ0_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 5.200e-16
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAK 45
            +DRLGKTFLSHLWQ RK+RLAIGDRSC N APSSRGRV N LTAK
Sbjct:  215 IDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK 259          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5KVX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX2_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 6.130e-16
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKA 46
            +DRLGKTFLSHLWQ RK+RLAIGDRSC N APSSRGRV N LTAKA
Sbjct:  450 IDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKA 495          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5L4L1_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L1_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 6.610e-16
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKA 46
            +DRLGKTFLSHLWQ RK+RLAIGDRSC N APSSRGRV N LTAKA
Sbjct:  735 IDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKA 780          
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Match: A0A6H5JDS3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS3_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 9.100e-16
Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKA 46
            MDRLGKTFLSHLWQ RK+RLAIGDRSC N APSSRG V N LTAKA
Sbjct:  837 MDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGHVVNGLTAKA 882          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8281.19626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD24_9PHAE1.150e-1780.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LRL5_9PHAE3.660e-1766.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JMW7_9PHAE7.360e-1766.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJX4_9PHAE9.420e-1782.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE77_9PHAE1.020e-1678.85Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L729_9PHAE1.780e-1675.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCQ0_9PHAE5.200e-1684.44Uncharacterized protein n=7 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVX2_9PHAE6.130e-1684.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4L1_9PHAE6.610e-1684.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JDS3_9PHAE9.100e-1684.78Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8281contigEcto-sp13_S_contig8281:6377..6709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8281.19626.1mRNA_Ecto-sp13_S_contig8281.19626.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8281 6192..6709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8281.19626.1 ID=prot_Ecto-sp13_S_contig8281.19626.1|Name=mRNA_Ecto-sp13_S_contig8281.19626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MDRLGKTFLSHLWQGRKDRLAIGDRSCRNRAPSSRGRVANDLTAKARNQL
EYDPPPDRQHAIRATAFPDGARKRMSSCYNLSAYNSLCHVGIHRTSVGIH
CISRQSGVVRH
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