prot_Ecto-sp13_S_contig8270.19617.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE) HSP 1 Score: 106 bits (264), Expect = 9.270e-27 Identity = 62/73 (84.93%), Postives = 64/73 (87.67%), Query Frame = 0
Query: 1 MVASQMFLGTAATLIASSTAFVAPVAVRSVATTASSSSLKMSAGSDYVATLPGAPSSDRKIFDPLGLSDAPPP 73
MVASQMF+GTAATLIASSTAFVAP+AVRSV TT SS LKMSAGSDYVATLPGAP SD KIFDPLGLSD P
Sbjct: 1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAP 73
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: A0A6H5JYI8_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI8_9PHAE) HSP 1 Score: 103 bits (258), Expect = 3.070e-26 Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 0
Query: 1 MVASQMFLGTAATLIASSTAFVAPVAVRSVATTASSSSLKMSAGSDYVATLPGAPSSDRKIFDPLGLSDAPPP 73
MVASQMF+GTAATLIASSTAFV P+A+RSVA+T SSS KMSAGSDYVATLPGAP SD KIFDPLGLSD P
Sbjct: 1 MVASQMFIGTAATLIASSTAFVGPMAMRSVASTPSSSGFKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAP 73
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI) HSP 1 Score: 100 bits (249), Expect = 3.530e-24 Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 0
Query: 1 MVASQMFLGTAATLIASSTAFVAPVAVRSVATTASSSSLKMSAGSDYVATLPGAPSSDRKIFDPLGLSDAPPP 73
MVASQMFLGTAA LIASSTAFVAPVAVRS A +++S+LKMSAGSDYVATLPGAP SD KIFDPL LSD P
Sbjct: 1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAP 73
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 6.430e-24 Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0
Query: 1 MVASQMFLGTAATLIASSTAFVAPVAVRSVATTASSSSLKMSAGSDYVATLPGAPSSDRKIFDPLGLSDAPPPA 74
MVA+Q+FLG+AATLIASSTAFVAP+AVRS A +SSS+LKMSAGSDYVATLPGAP D KIFDPL LSD PA
Sbjct: 1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPA 74
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.140e-21 Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
Query: 4 SQMFLGTAATLIASSTAFVAPVAVRSVATTASSSSLKMSAGSDYVATLPGAPSSDRKIFDPLGLSDAPPP 73
S MFLGTAATLIASSTAFVAP+AVRS A +S+S+LKMSAGSDYVATLPGAP D KIFDPL LSD P
Sbjct: 5 SNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEP 74
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: D7G7S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S4_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 4.740e-20 Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0
Query: 1 MVASQMFLGTAATLIASSTAFVAPVAVRSVATTASSSSLKMSAGSDYVATLPGAPSSDRK 60
MVASQMF+G AATLIASSTAFVAP+AV SVATT SS+SLKMSAGSDYVATLPGAP SD K
Sbjct: 1 MVASQMFIGAAATLIASSTAFVAPMAVPSVATTTSSASLKMSAGSDYVATLPGAPFSDGK 60
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: A0A6H5JWJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ2_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 3.120e-18 Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0
Query: 1 MVASQMFLGTAATLIASSTAFVAPVAVRSVA-TTASSSSLKMSAGSDYVATLPGAPSSDRK 60
MVASQMF+GTAATLIASSTAFVAP+AVRSVA TT SSSSL MSAGSDYVATLPGAP SD K
Sbjct: 1 MVASQMFIGTAATLIASSTAFVAPMAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGK 61
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 6.510e-18 Identity = 57/68 (83.82%), Postives = 58/68 (85.29%), Query Frame = 0
Query: 1 MVASQMFLGTAATLIASSTAFVAPVAVRSVA-TTASSSSLKMSAGSDYVATLPGAPSSDRKIFDPLGL 67
MVASQMF+GTAATLIASSTAFVAPVAVRSVA TT SSSSL MSAGSDYVATLPGAP SD K P L
Sbjct: 1 MVASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRL 68
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: A0A6H5J914_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J914_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.650e-16 Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0
Query: 6 MFLGTAATLIASSTAFVAPVAVRSVATTA-SSSSLKMSAGSDYVATLPGAPSSDRKIF 62
MF+GTAATLIASSTAFVAP+AVRSVA TA SSSS+ MSAGSDYVATLPGAP SD K F
Sbjct: 1 MFIGTAATLIASSTAFVAPMAVRSVAITAPSSSSVMMSAGSDYVATLPGAPFSDGKGF 58
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 1.950e-14 Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 0
Query: 4 SQMFLGTAATLIASSTAFVAPVAVRSVATTASSSSLKMSAGSDYVATLPGAPSSDRKIFDPLGLSDAPPP 73
S MFLGTAATLIASS AFV P+AVRS A +S+S+LKMSAG+DY+ATLPGA + KIFD L L+D P
Sbjct: 5 SNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADP 71 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8270.19617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig8270.19617.1 ID=prot_Ecto-sp13_S_contig8270.19617.1|Name=mRNA_Ecto-sp13_S_contig8270.19617.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bpback to top |