prot_Ecto-sp13_S_contig8214.19571.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8214.19571.1
Unique Nameprot_Ecto-sp13_S_contig8214.19571.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: D7G329_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G329_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.070e-81
Identity = 121/124 (97.58%), Postives = 123/124 (99.19%), Query Frame = 0
Query:   11 LHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPPDLADDECAHIRDEVD 134
            LHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQG RRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCIS+GEKPVVQPPDLAD+ECAHIRDEVD
Sbjct:   24 LHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGGRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISSGEKPVVQPPDLADEECAHIRDEVD 147          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: D7FZ74_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ74_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.120e-79
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0
Query:    7 PPSRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPPDLADDECAHIRDEVD 134
            P  RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCIS+GEKPVVQPPDLAD+ECAHIRDEVD
Sbjct:  394 PRRRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISSGEKPVVQPPDLADEECAHIRDEVD 521          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: V4AL80_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AL80_LOTGI)

HSP 1 Score: 128 bits (321), Expect = 1.110e-31
Identity = 63/111 (56.76%), Postives = 82/111 (73.87%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYR-LCISNGEKPVVQPP 119
            R+HITLELPWSAD+AIQQ GRTHR+NQ   P Y  ++SE+ GE RF++ VAKRLESLGALT GDRRA+         + FN+DN+YG+ +LD + + + + NGE P+V PP
Sbjct:  773 RVHITLELPWSADRAIQQFGRTHRSNQIHAPEYIFLISELAGERRFASTVAKRLESLGALTHGDRRATET----RDLSRFNIDNKYGRAALDSVMKSVLVLNGELPLVPPP 879          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: G0MWK5_CAEBE (CBN-LET-765 protein n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0MWK5_CAEBE)

HSP 1 Score: 128 bits (321), Expect = 1.130e-31
Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPP 119
            R+HITLELPWSADKAIQQ GRTHR+NQ   P Y  ++SE+ GE RF++ VAKRLESLGALT GDRRA+         + FN+DN+YG+++LD + +  I  G  P++ PP
Sbjct: 1452 RVHITLELPWSADKAIQQFGRTHRSNQVSGPEYVFLISELAGEKRFASIVAKRLESLGALTHGDRRATET----RDLSQFNMDNKYGRVALDTLLKTVIGQGGPPLIDPP 1557          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: A0A158PNI9_ANISI (Protein strawberry notch homolog 1 (inferred by orthology to a human protein) n=1 Tax=Anisakis simplex TaxID=6269 RepID=A0A158PNI9_ANISI)

HSP 1 Score: 126 bits (317), Expect = 3.920e-31
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPP 119
            R+HITLELPWSADKAIQQ GRTHR+NQ   P Y  ++SE+ GE RF++ VAKRLESLGALT GDRRA+ +       + FNVD +YG+ +LD + R  I +   P++QPP
Sbjct: 1416 RVHITLELPWSADKAIQQFGRTHRSNQVNAPEYIFLISELAGEKRFASIVAKRLESLGALTHGDRRATES----RDLSQFNVDTRYGRSALDILLRSVIGSMNPPLIQPP 1521          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: A0A1I7UP37_9PELO (Phorbol-ester/DAG-type domain-containing protein n=1 Tax=Caenorhabditis tropicalis TaxID=1561998 RepID=A0A1I7UP37_9PELO)

HSP 1 Score: 126 bits (317), Expect = 3.930e-31
Identity = 61/110 (55.45%), Postives = 80/110 (72.73%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPP 119
            R+HITLELPWSADKAIQQ GRTHR+NQ   P Y  ++SE+ GE RF++ VAKRLESLGALT GDRRA+         + FN+DN+YG+++LD + +  I     P+++PP
Sbjct: 1609 RVHITLELPWSADKAIQQFGRTHRSNQVSGPEYVFLISELAGEKRFASIVAKRLESLGALTHGDRRATET----RDLSQFNMDNKYGRVALDTLLKTVIGQAGAPLIEPP 1714          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: A0A2H2I3Z3_CAEJA (Uncharacterized protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2I3Z3_CAEJA)

HSP 1 Score: 126 bits (316), Expect = 5.160e-31
Identity = 61/110 (55.45%), Postives = 80/110 (72.73%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPP 119
            R+HITLELPWSADKAIQQ GRTHR+NQ   P Y  ++SE+ GE RF++ VAKRLESLGALT GDRRA+         + FN+DN+YG+++LD + +  I     P+++PP
Sbjct:  590 RVHITLELPWSADKAIQQFGRTHRSNQVSGPEYVFLISELAGEKRFASVVAKRLESLGALTHGDRRATET----RDLSQFNMDNKYGRVALDTLLKTVIGQTNPPLLEPP 695          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: UPI0019D5E0A7 (protein FORGETTER 1-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5E0A7)

HSP 1 Score: 126 bits (316), Expect = 5.250e-31
Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPPDLADDECA 127
            R+HITLELPWSAD+AIQQ GRTHR+NQ   P Y+L+ + + GE RF++ VAKRLESLGALTQGDRRA       L  +AFN D+ YGK +L  +YR  +     PVV PP+ +DDE +
Sbjct:  876 RVHITLELPWSADRAIQQFGRTHRSNQTSAPQYRLLFTNLGGEKRFASIVAKRLESLGALTQGDRRAG------LSLSAFNYDSNYGKKALTMMYRGIMEQDSFPVV-PPECSDDEAS 986          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: A8XLN5_CAEBR (Protein CBR-LET-765 n=2 Tax=Caenorhabditis TaxID=6237 RepID=A8XLN5_CAEBR)

HSP 1 Score: 126 bits (316), Expect = 5.340e-31
Identity = 61/110 (55.45%), Postives = 80/110 (72.73%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPP 119
            R+HITLELPWSADKAIQQ GRTHR+NQ   P Y  ++SE+ GE RF++ VAKRLESLGALT GDRRA+         + FN+DN+YG+++LD + +  I     P+++PP
Sbjct: 1394 RVHITLELPWSADKAIQQFGRTHRSNQVSGPEYVFLISELAGEKRFASIVAKRLESLGALTHGDRRATET----RDLSQFNMDNKYGRVALDTLLKTVIGQAGVPLIEPP 1499          
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Match: SBNO_CAEEL (Protein strawberry notch homolog n=1 Tax=Caenorhabditis elegans TaxID=6239 RepID=SBNO_CAEEL)

HSP 1 Score: 125 bits (315), Expect = 7.290e-31
Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 0
Query:   10 RLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVCGETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSLDHIYRLCISNGEKPVVQPP 119
            R+HITLELPWSADKAIQQ GRTHR+NQ   P Y  ++SE+ GE RF++ VAKRLESLGALT GDRRA+         + FN+DN+YG+++LD + +  I     P++ PP
Sbjct: 1441 RVHITLELPWSADKAIQQFGRTHRSNQVSGPEYVFLISELAGEKRFASIVAKRLESLGALTHGDRRATET----RDLSQFNMDNKYGRVALDTLLKTVIGQAGTPLIDPP 1546          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8214.19571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G329_ECTSI1.070e-8197.58Helicase_C_4 domain-containing protein n=1 Tax=Ect... [more]
D7FZ74_ECTSI6.120e-7996.88Helicase_C_4 domain-containing protein n=1 Tax=Ect... [more]
V4AL80_LOTGI1.110e-3156.76Uncharacterized protein (Fragment) n=1 Tax=Lottia ... [more]
G0MWK5_CAEBE1.130e-3156.36CBN-LET-765 protein n=1 Tax=Caenorhabditis brenner... [more]
A0A158PNI9_ANISI3.920e-3157.27Protein strawberry notch homolog 1 (inferred by or... [more]
A0A1I7UP37_9PELO3.930e-3155.45Phorbol-ester/DAG-type domain-containing protein n... [more]
A0A2H2I3Z3_CAEJA5.160e-3155.45Uncharacterized protein n=1 Tax=Caenorhabditis jap... [more]
UPI0019D5E0A75.250e-3156.78protein FORGETTER 1-like n=1 Tax=Panicum virgatum ... [more]
A8XLN5_CAEBR5.340e-3155.45Protein CBR-LET-765 n=2 Tax=Caenorhabditis TaxID=6... [more]
SBNO_CAEEL7.290e-3155.45Protein strawberry notch homolog n=1 Tax=Caenorhab... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026937Strawberry notch, helicase C domainPFAMPF13871Helicase_C_4coord: 10..123
e-value: 1.1E-43
score: 149.9
NoneNo IPR availablePANTHERPTHR12706:SF30coord: 10..109
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 10..109
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8214contigEcto-sp13_S_contig8214:4941..6995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8214.19571.1mRNA_Ecto-sp13_S_contig8214.19571.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8214 4941..6995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8214.19571.1 ID=prot_Ecto-sp13_S_contig8214.19571.1|Name=mRNA_Ecto-sp13_S_contig8214.19571.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
SVLAPPPPSRLHITLELPWSADKAIQQLGRTHRANQFQPPIYQLIVSEVC
GETRFSAAVAKRLESLGALTQGDRRASHAGAGELGFTAFNVDNQYGKMSL
DHIYRLCISNGEKPVVQPPDLADDECAHIRDEVDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026937SBNO_Helicase_C_dom
IPR026741SNO
IPR027417P-loop_NTPase