prot_Ecto-sp13_S_contig8211.19570.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8211.19570.1
Unique Name	prot_Ecto-sp13_S_contig8211.19570.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	651

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig8211.19570.1 vs. uniprot
Match: A0A6H5JH51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH51_9PHAE)

HSP 1 Score: 1218 bits (3152), Expect = 0.000e+0
Identity = 627/651 (96.31%), Postives = 641/651 (98.46%), Query Frame = 0

Query:    1 MPHLEERDLKLLDEAVSILNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEEGDVA-EDMTPEAAAAALRVSEREKEEEAMKKPPKLPEIILFWGRNMRRGGNLVVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFRERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMRDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAVFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDMSQVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGAVAVTIYVGVSYDLEGPGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTTLMLINKVSLTWRRMANEVVSHARDSAQGEFSVRDILKFLLQVLPLTPLFLVSLPIPVLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPNRPYWHLCKTSANRLGCIAVNIGTGEEESSKTLLVSPDYIPDKPLAHADAPASVC 650
            MPHLEERDLKLLDEA+S+LNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEE DVA ED+TPEAAAAALRVSER+KEEEAMKKPPKLPEIILFWGRNMRRGGNL+VCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFRERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARM+DPIVRVSQCRLVRHHQGQLSGQGFLAIGLA FGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDMS+VSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSG V VTI+VGVS++ EG GYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDT LMLINKVSLTWRRMANEVVSHARDSA+GEFSVRDILKFLLQVLPLTPLFLVSLPIP+LYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIP+RPYWHL KTSANRLGCIAV IGTGEEE+SKTLLVSPDYIPDKPLAHADAPASVC
Sbjct:   34 MPHLEERDLKLLDEAISLLNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEESDVAPEDLTPEAAAAALRVSERDKEEEAMKKPPKLPEIILFWGRNMRRGGNLIVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFRERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDMSRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGGVTVTIFVGVSHEFEGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTALMLINKVSLTWRRMANEVVSHARDSARGEFSVRDILKFLLQVLPLTPLFLVSLPIPLLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPSRPYWHLSKTSANRLGCIAVKIGTGEEENSKTLLVSPDYIPDKPLAHADAPASVC 684

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8211.19570.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8211.19570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JH51_9PHAE	0.000e+0	96.31	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 396..400
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 237..259
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 317..339
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 373..395
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 260..287
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 213..231
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 288..305
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 340..372
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 306..316
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 401..421
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 490..517
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 450..489
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..212
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 518..650
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 428..449
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 422..427
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 232..236
None	No IPR available	TMHMM	TMhelix		coord: 237..259
None	No IPR available	TMHMM	TMhelix		coord: 373..395
None	No IPR available	TMHMM	TMhelix		coord: 317..339
None	No IPR available	TMHMM	TMhelix		coord: 427..449
None	No IPR available	TMHMM	TMhelix		coord: 402..421
None	No IPR available	TMHMM	TMhelix		coord: 208..230
None	No IPR available	TMHMM	TMhelix		coord: 288..310
None	No IPR available	TMHMM	TMhelix		coord: 494..516

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8211	contig	Ecto-sp13_S_contig8211:2818..5852 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8211.19570.1	mRNA_Ecto-sp13_S_contig8211.19570.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8211 2732..6035 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8211.19570.1 ID=prot_Ecto-sp13_S_contig8211.19570.1|Name=mRNA_Ecto-sp13_S_contig8211.19570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=651bp
MPHLEERDLKLLDEAVSILNPPEAHVRVVEVDTFTESERSIVKGSARIGH
GDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEEGDVAEDMTPEAAA
AALRVSEREKEEEAMKKPPKLPEIILFWGRNMRRGGNLVVCPGESSMDRL
IQAYLVCEVVQDSKLFDKSVTSFRERVTTERKGGLMGVELGETSTAEQDA
LENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLN
QEATWPWVFKHILLCARMRDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAV
FGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDMSQV
SPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGAVAVTIYVGVSYDLE
GPGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFD
TTLMLINKVSLTWRRMANEVVSHARDSAQGEFSVRDILKFLLQVLPLTPL
FLVSLPIPVLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSV
TWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPNRPYW
HLCKTSANRLGCIAVNIGTGEEESSKTLLVSPDYIPDKPLAHADAPASVC
*