prot_Ecto-sp13_S_contig81608.19505.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig81608.19505.1
Unique Nameprot_Ecto-sp13_S_contig81608.19505.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
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BLAST of mRNA_Ecto-sp13_S_contig81608.19505.1 vs. uniprot
Match: D7FGW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW1_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 5.730e-29
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0 
Query:    1 MLRKMKPGLRRSYFTAYHSFLMTARRTLGPRDRKETLRQAVEASLKDCKAREREGGPCEQPDRP 64
            +LRKMKPGLRRSYFTA HSF MTA+R LGP DR+ETL QAV+ASLKDC+AREREGGP EQPDRP
Sbjct:   23 LLRKMKPGLRRSYFTACHSFYMTAKRALGPHDRQETLAQAVDASLKDCEAREREGGPSEQPDRP 86
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig81608.19505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGW1_ECTSI5.730e-2982.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig81608contigEcto-sp13_S_contig81608:111..506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig81608.19505.1mRNA_Ecto-sp13_S_contig81608.19505.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig81608 90..506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig81608.19505.1 ID=prot_Ecto-sp13_S_contig81608.19505.1|Name=mRNA_Ecto-sp13_S_contig81608.19505.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
MLRKMKPGLRRSYFTAYHSFLMTARRTLGPRDRKETLRQAVEASLKDCKA
REREGGPCEQPDRP
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