prot_Ecto-sp13_S_contig816.19503.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig816.19503.1
Unique Nameprot_Ecto-sp13_S_contig816.19503.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 4.550e-40
Identity = 71/108 (65.74%), Postives = 93/108 (86.11%), Query Frame = 0
Query:   18 SDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDRSVTDDSNMPDVVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            +DRGI APT+++ID I++FIL KM G+ H QLS+D+ V DD NMPDV SVEYL+ +N PGTPPH L++K G+LIFFIRNI+FD GLVNG++G+IRGISRRV+D+EV++
Sbjct:  555 TDRGILAPTSDDIDQIHDFILRKMPGNVHEQLSSDKIVKDDENMPDVASVEYLNIINAPGTPPHKLNLKGGALIFFIRNIDFDCGLVNGKRGVIRGISRRVIDVEVLS 662          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: UPI001248E764 (uncharacterized protein LOC115985495 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001248E764)

HSP 1 Score: 88.6 bits (218), Expect = 3.830e-19
Identity = 46/130 (35.38%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    1 LVDRIYPDLLS--VDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDRSVTDDSNMPD---VVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            ++D  YP L +  +D +   DR I APTNE ++ +N++I+  + G+ H  LS+D      SN+PD   + +VE+ + +  PG P H L +K+G  +  +RN+N + GL NG + II  ++  V++ E+IT
Sbjct:   58 IIDNTYPGLENKYIDPSYLHDRAILAPTNEVVEELNDYIVSSLNGEVHEYLSSDSICKASSNVPDQDLLYTVEFFNTLRFPGLPNHKLTLKIGLPVMLLRNLNQNEGLCNGTRLIITRLATWVIEAEIIT 187          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: UPI000CE24850 (uncharacterized protein LOC112023830 n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE24850)

HSP 1 Score: 86.3 bits (212), Expect = 1.640e-18
Identity = 46/130 (35.38%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    1 LVDRIYPDLLS--VDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDRSVTDDSNMPD---VVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            ++D  YP L +   + +   +R I APTNE ++ +N++I+  + G+ H  LS+D      SN+PD   + +VE+L+ +  PG P H L +K+G  I  +RN+N + GL NG + II  ++  V++ E+IT
Sbjct:   58 IIDNTYPGLETKYTNPSYLQERAILAPTNEVVEELNDYIVSSLNGEVHEYLSSDSICKASSNVPDQEILYTVEFLNTLRFPGLPNHKLTLKIGLPIMLLRNLNQNKGLCNGTRLIITRLATWVIEAEIIT 187          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: A0A7N2RDL0_QUELO (ATP-dependent DNA helicase n=7 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2RDL0_QUELO)

HSP 1 Score: 89.4 bits (220), Expect = 3.150e-18
Identity = 47/130 (36.15%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    1 LVDRIYPDLLS--VDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDRSVTDDSNMPD---VVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            ++D  YP L +   D +   DR I APTNE ++ +N++I+  + G+ H  LS+D      SN+PD   + +VE+L+ +  PG P H L +K+G  +  +RN+N + GL NG + II  ++  V++ E+IT
Sbjct: 1231 IIDNTYPGLENKYTDPSYLQDRAILAPTNEVVEELNDYIVSSLNGEVHEYLSSDSICKASSNVPDQDLLYTVEFLNTLRFPGLPNHKLTLKIGLPVMLLRNLNQNEGLCNGTRLIITRLATWVIEAEIIT 1360          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: A0A7N2R7F0_QUELO (ATP-dependent DNA helicase n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2R7F0_QUELO)

HSP 1 Score: 89.0 bits (219), Expect = 4.310e-18
Identity = 47/130 (36.15%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    1 LVDRIYPDLLS--VDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDRSVTDDSNMPD---VVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            ++D  YP L +   D +   DR I APTNE ++ +N++I+  + G+ H  LS+D      SN+PD   + +VE+L+ +  PG P H L +K+G  +  +RN+N + GL NG + II  ++  V++ E+IT
Sbjct: 1006 IIDSTYPGLENKYTDPSYLQDRAILAPTNEVVEELNDYIVSSLNGEVHEYLSSDSICKASSNVPDQDLLYTVEFLNTLRFPGLPNHKLTLKIGLPVMLLRNLNQNEGLCNGTRLIITRLATWVIEAEIIT 1135          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: UPI0012455A0B (uncharacterized protein LOC115966501 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI0012455A0B)

HSP 1 Score: 88.2 bits (217), Expect = 6.960e-18
Identity = 47/130 (36.15%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    1 LVDRIYPDLLS--VDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDRSVTDDSNMPD---VVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            ++D  YP L +   D +   DR I APTNE ++ +N++I+  + G+ H  LS+D      SN+PD   +  VE+L+ +  PG P H L +K+G  +  +RN+N + GL NG + II  ++  V++ E+IT
Sbjct:  284 IIDNTYPGLENKYTDPSYLQDRAILAPTNEVVEELNDYIVSSLNGEVHEYLSSDSICKASSNVPDQDLLYIVEFLNTLRFPGLPNHKLTLKIGLPVMLLRNLNQNEGLCNGTRLIITRLATWVIEAEIIT 413          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: A0A6P5N960_ARADU (ATP-dependent DNA helicase n=2 Tax=Arachis TaxID=3817 RepID=A0A6P5N960_ARADU)

HSP 1 Score: 87.0 bits (214), Expect = 7.430e-18
Identity = 46/131 (35.11%), Postives = 82/131 (62.60%), Query Frame = 0
Query:    1 LVDRIYPDLL--SVDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDR----SVTDDSNMPDVVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            +V+ IYP+L+  S D + + DR I APT +N++ INN+I+D + G+  + LS D      V  D ++ D ++VE+L+++   G P H+L +K+G  I  +RNI+   GL NG + ++R + R V+  ++++
Sbjct:  102 IVNTIYPNLVQNSCDPSFFQDRAILAPTVDNVEEINNYIVDLLPGEEKNYLSADSICGSDVYSDVDV-DWINVEFLNQIRCSGLPNHSLKLKIGVPIILLRNIDLAGGLCNGTRLVVRDLGRNVIGADIVS 231          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: D7G7Y0_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Y0_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 2.340e-17
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0
Query:   61 MPDVVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGR--KGIIRG 113
            MPD+VS+EYL+ +NVPGTPPH  ++K G+LIFFIRNINFD G VNG   +G+I G
Sbjct:    1 MPDIVSLEYLNSINVPGTPPHKFNLKFGALIFFIRNINFDCGPVNGNGERGLIEG 55          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: UPI0010366A0A (uncharacterized protein LOC114322548 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010366A0A)

HSP 1 Score: 86.7 bits (213), Expect = 2.480e-17
Identity = 48/129 (37.21%), Postives = 75/129 (58.14%), Query Frame = 0
Query:    1 LVDRIYPDLLSV--DHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDR--SVTDDSNMPDVVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            L+D  YPD ++   D +   +RGI AP N ++D IN+ +L  + G+     S D+      +SN+ D+   E LH +N+PG P H L +K+G+LI  +RN+N   GL NG + I+  +  RV++  VIT
Sbjct:  363 LIDATYPDFINKYQDMSYLKERGILAPKNSDVDEINSIMLSMLPGEMKIFNSADKLCPTESESNVQDMNPPELLHSLNLPGLPNHCLQLKVGTLIMLLRNVNQSLGLCNGTRLIVDKMGNRVIEARVIT 491          
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Match: UPI001246563E (ATP-dependent DNA helicase PIF1-like n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001246563E)

HSP 1 Score: 85.5 bits (210), Expect = 3.680e-17
Identity = 45/130 (34.62%), Postives = 76/130 (58.46%), Query Frame = 0
Query:    1 LVDRIYPDLLS--VDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLSTDRSVTDDSNMPD---VVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFDSGLVNGRKGIIRGISRRVLDIEVIT 125
            ++D  YP L +   D +C  DR I APTNE ++ +N++ +  + G+ H  LS+D      SN+PD   + + E+L+ +   G P H L +K+G  +  +RN+N + GL NG + II  ++  V++ E+IT
Sbjct:  136 IIDNTYPGLENKYTDPSCLQDRAILAPTNEVVEELNDYNVSSLNGEVHEYLSSDSICKASSNVPDQDLLYTFEFLNTLRFLGLPNHKLTLKIGLPVMLLRNLNQNEGLCNGTRFIITRLATWVIEAEIIT 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig816.19503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCL4_ECTSI4.550e-4065.74ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
UPI001248E7643.830e-1935.38uncharacterized protein LOC115985495 n=1 Tax=Querc... [more]
UPI000CE248501.640e-1835.38uncharacterized protein LOC112023830 n=1 Tax=Querc... [more]
A0A7N2RDL0_QUELO3.150e-1836.15ATP-dependent DNA helicase n=7 Tax=Quercus lobata ... [more]
A0A7N2R7F0_QUELO4.310e-1836.15ATP-dependent DNA helicase n=1 Tax=Quercus lobata ... [more]
UPI0012455A0B6.960e-1836.15uncharacterized protein LOC115966501 n=1 Tax=Querc... [more]
A0A6P5N960_ARADU7.430e-1835.11ATP-dependent DNA helicase n=2 Tax=Arachis TaxID=3... [more]
D7G7Y0_ECTSI2.340e-1765.45ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
UPI0010366A0A2.480e-1737.21uncharacterized protein LOC114322548 n=1 Tax=Camel... [more]
UPI001246563E3.680e-1734.62ATP-dependent DNA helicase PIF1-like n=1 Tax=Querc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 2..112
e-value: 6.8E-24
score: 84.7
NoneNo IPR availablePANTHERPTHR10492:SF71coord: 2..125
NoneNo IPR availablePANTHERPTHR10492UNCHARACTERIZEDcoord: 2..125
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig816contigEcto-sp13_S_contig816:205..579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig816.19503.1mRNA_Ecto-sp13_S_contig816.19503.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig816 205..579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig816.19503.1 ID=prot_Ecto-sp13_S_contig816.19503.1|Name=mRNA_Ecto-sp13_S_contig816.19503.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
LVDRIYPDLLSVDHNCYSDRGIFAPTNENIDNINNFILDKMQGDGHHQLS
TDRSVTDDSNMPDVVSVEYLHEVNVPGTPPHNLHIKLGSLIFFIRNINFD
SGLVNGRKGIIRGISRRVLDIEVIT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like
IPR027417P-loop_NTPase