prot_Ecto-sp13_S_contig8148.19492.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig8148.19492.1
Unique Name	prot_Ecto-sp13_S_contig8148.19492.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	218

Homology

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BLAST of mRNA_Ecto-sp13_S_contig8148.19492.1 vs. uniprot
Match: D8LFY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY6_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 3.510e-130
Identity = 207/219 (94.52%), Postives = 211/219 (96.35%), Query Frame = 0

Query:    1 MGGGHGMDAEMELSLVAALQASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFADLSSSSSPRPQAADETSAALNDGSQATTTTTATPETPAPGEAREDFGERQGQTTAARDDGEEPLQLLLELGAGRLGAGVDGIHKSLSLMAGAL-GPKSLRVRRAFASALRAHLRTVRVDSVFRFDAPKAG 218
            MGGGHGM AEMELSLVAALQASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFADLSSS SPRPQAADET+AALNDGSQA T TTATPETPAPGEARED GERQGQTTAARDDGEEPLQLLLELGAGRLGAGVDGIH+SLSLMAGAL G +S+RVRRAFASALRAHL TVRVDSVFRFDAPKAG
Sbjct:    1 MGGGHGMGAEMELSLVAALQASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFADLSSSGSPRPQAADETAAALNDGSQAATATTATPETPAPGEAREDLGERQGQTTAARDDGEEPLQLLLELGAGRLGAGVDGIHRSLSLMAGALLGLRSMRVRRAFASALRAHLGTVRVDSVFRFDAPKAG 219

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BLAST of mRNA_Ecto-sp13_S_contig8148.19492.1 vs. uniprot
Match: A0A6H5KTN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN6_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 1.840e-125
Identity = 201/218 (92.20%), Postives = 206/218 (94.50%), Query Frame = 0

Query:    1 MGGGHGMDAEMELSLVAALQASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFADLSSSSSPRPQAADETSAALNDGSQATTTTTATPETPAPGEAREDFGERQGQTTAARDDGEEPLQLLLELGAGRLGAGVDGIHKSLSLMAGALGPKSLRVRRAFASALRAHLRTVRVDSVFRFDAPKAG 218
            MGGGHGM AEMELSLVAALQASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFA+LSS S PRPQA DET+  LN+GSQATTTTTATPETPAPGEA ED GERQG TTAARDDGEEPLQLLLELGAGRLGAGVDGI KSLSLMAG LGPKS+RVRRAFASALRAHL TVR+DSVFRFDAPKAG
Sbjct:    1 MGGGHGMGAEMELSLVAALQASSMPASLLQALRTLDQELGEETEREALDGVVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFANLSSCSDPRPQAVDETADELNNGSQATTTTTATPETPAPGEASEDLGERQGHTTAARDDGEEPLQLLLELGAGRLGAGVDGIRKSLSLMAGDLGPKSMRVRRAFASALRAHLGTVRLDSVFRFDAPKAG 218

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig8148.19492.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig8148.19492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LFY6_ECTSI	3.510e-130	94.52	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KTN6_9PHAE	1.840e-125	92.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..218
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig8148	contig	Ecto-sp13_S_contig8148:1923..4606 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig8148.19492.1	mRNA_Ecto-sp13_S_contig8148.19492.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig8148 1836..4606 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig8148.19492.1 ID=prot_Ecto-sp13_S_contig8148.19492.1|Name=mRNA_Ecto-sp13_S_contig8148.19492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp
MGGGHGMDAEMELSLVAALQASSMPASLLQALRTLDQELGEETEREALDG
VVDSLVEWFLHESRAPRTADGDDLGLCLRAACWLAPRFADLSSSSSPRPQ
AADETSAALNDGSQATTTTTATPETPAPGEAREDFGERQGQTTAARDDGE
EPLQLLLELGAGRLGAGVDGIHKSLSLMAGALGPKSLRVRRAFASALRAH
LRTVRVDSVFRFDAPKAG