prot_Ecto-sp13_S_contig81352.19478.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig81352.19478.1
Unique Nameprot_Ecto-sp13_S_contig81352.19478.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length37
Homology
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BLAST of mRNA_Ecto-sp13_S_contig81352.19478.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.400e-13
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:    1 MEGLTWEEKYLRLRDDHTSLTHKANEQDDTIRR 33
            MEGLTWEEKYLRLRDDHTSLTHKANEQDDTIRR
Sbjct:    1 MEGLTWEEKYLRLRDDHTSLTHKANEQDDTIRR 33
[Close]
BLAST of mRNA_Ecto-sp13_S_contig81352.19478.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.790e-7
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:    1 MEGLTWEEKYLRLRDDHTSLTHKANEQDDTIRR 33
            ME L++EE+YL LRD+H SLTHK NEQ+DTIRR
Sbjct:    1 MEALSYEERYLSLRDEHVSLTHKCNEQEDTIRR 33
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig81352.19478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSF7_ECTSI1.400e-13100.00C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CCF4_9STRA1.790e-772.73EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig81352contigEcto-sp13_S_contig81352:39..149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig81352.19478.1mRNA_Ecto-sp13_S_contig81352.19478.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig81352 15..149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig81352.19478.1 ID=prot_Ecto-sp13_S_contig81352.19478.1|Name=mRNA_Ecto-sp13_S_contig81352.19478.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp
MEGLTWEEKYLRLRDDHTSLTHKANEQDDTIRRWDKP
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