prot_Ecto-sp13_S_contig81350.19477.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig81350.19477.1
Unique Nameprot_Ecto-sp13_S_contig81350.19477.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: D8LMH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMH0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.800e-18
Identity = 41/45 (91.11%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    7 LSPPQVPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            L    VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ
Sbjct:  153 LCEKMVPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 197          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: A0A835Z1D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1D0_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.780e-10
Identity = 30/40 (75.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            VPE + K LAPFQ++GV FVL K GRAMI DEMGLGKTIQ
Sbjct:  515 VPEQLLKALAPFQREGVSFVLSKGGRAMIGDEMGLGKTIQ 554          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: A0A6P8QMY4_GEOSA (LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8QMY4_GEOSA)

HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            +P+ +R+ L PFQK+G++F LK++GR M+ADEMGLGKTIQ
Sbjct:   16 LPQKLREQLLPFQKEGIKFALKRDGRCMLADEMGLGKTIQ 55          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: A0A6P7YTX7_9AMPH (LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3-like n=2 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7YTX7_9AMPH)

HSP 1 Score: 61.2 bits (147), Expect = 1.220e-9
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            +P+ +R+ L PFQK+G++F LK++GR M+ADEMGLGKTIQ
Sbjct:   16 LPQKLREQLLPFQKEGIKFALKRDGRCMLADEMGLGKTIQ 55          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: G3WVC9_SARHA (Zinc finger RANBP2-type containing 3 n=6 Tax=Metatheria TaxID=9263 RepID=G3WVC9_SARHA)

HSP 1 Score: 60.5 bits (145), Expect = 2.280e-9
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            +PE +R  L PFQK G+ F LK++GR M+ADEMGLGKTIQ
Sbjct:   53 LPEKLRARLLPFQKDGITFALKRDGRCMVADEMGLGKTIQ 92          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: A0A7S4ERR1_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ERR1_CHRCT)

HSP 1 Score: 58.2 bits (139), Expect = 2.440e-9
Identity = 22/40 (55.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            +P  +R  LAPFQ++GV+F++++ GRA++AD+MGLGKT+Q
Sbjct:    3 LPPALRDALAPFQREGVDFIVRRNGRALLADDMGLGKTVQ 42          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: A0A7J8FVC6_MOLMO (Zinc finger RANBP2-type containing 3 n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8FVC6_MOLMO)

HSP 1 Score: 60.1 bits (144), Expect = 3.000e-9
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            +P+ +R  L PFQK+G+ F LK++GR M+ADEMGLGKTIQ
Sbjct:   29 LPDKLRAKLLPFQKEGISFALKRDGRCMVADEMGLGKTIQ 68          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: B7FV33_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FV33_PHATC)

HSP 1 Score: 60.1 bits (144), Expect = 3.120e-9
Identity = 27/40 (67.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            VP  + K LAPFQ+ GV+FVL+K+GRA+IAD+MGLGKT+Q
Sbjct:  436 VPRGLAKALAPFQRGGVDFVLEKDGRALIADDMGLGKTMQ 475          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: A0A7J8FUQ8_MOLMO (Zinc finger RANBP2-type containing 3 n=7 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8FUQ8_MOLMO)

HSP 1 Score: 60.1 bits (144), Expect = 3.120e-9
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            +P+ +R  L PFQK+G+ F LK++GR M+ADEMGLGKTIQ
Sbjct:   49 LPDKLRAKLLPFQKEGISFALKRDGRCMVADEMGLGKTIQ 88          
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Match: A0A448Z7B3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7B3_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 3.120e-9
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:   12 VPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQ 51
            VP  +   LAPFQ+ GVEFV++KEGRA+IAD+MGLGKTIQ
Sbjct:  452 VPRGLATALAPFQRGGVEFVVEKEGRALIADDMGLGKTIQ 491          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig81350.19477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMH0_ECTSI4.800e-1891.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z1D0_9STRA4.780e-1075.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6P8QMY4_GEOSA1.220e-962.50LOW QUALITY PROTEIN: DNA annealing helicase and en... [more]
A0A6P7YTX7_9AMPH1.220e-962.50LOW QUALITY PROTEIN: DNA annealing helicase and en... [more]
G3WVC9_SARHA2.280e-965.00Zinc finger RANBP2-type containing 3 n=6 Tax=Metat... [more]
A0A7S4ERR1_CHRCT2.440e-955.00Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7J8FVC6_MOLMO3.000e-962.50Zinc finger RANBP2-type containing 3 n=1 Tax=Molos... [more]
B7FV33_PHATC3.120e-967.50Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7J8FUQ8_MOLMO3.120e-962.50Zinc finger RANBP2-type containing 3 n=7 Tax=Molos... [more]
A0A448Z7B3_9STRA3.120e-970.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 6..51
e-value: 3.6E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 11..51
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig81350contigEcto-sp13_S_contig81350:197..349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig81350.19477.1mRNA_Ecto-sp13_S_contig81350.19477.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig81350 197..349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig81350.19477.1 ID=prot_Ecto-sp13_S_contig81350.19477.1|Name=mRNA_Ecto-sp13_S_contig81350.19477.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
MIRIYLLSPPQVPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTI
Q
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase