prot_Ecto-sp13_S_contig8088.19428.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8088.19428.1
Unique Nameprot_Ecto-sp13_S_contig8088.19428.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length629
Homology
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: D7FM10_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM10_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 2.200e-47
Identity = 343/470 (72.98%), Postives = 351/470 (74.68%), Query Frame = 0
Query:    1 MHCTDMTFANGNASSGGAMFVGESSVRFSGATSFAGNVATHDTTDDGGHGGAIFAAYSTLVFDGSGDATLTVNSASRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHGSTVSLDGDGTRFSYNSANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADSQGGAIHATAGXXXXXXXXXXXXXXXXXXXXXXXXYTDFSXXXXXXXXXXXXHNYGGQGXSIRAYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDGGAMYMDYGGSLRCDGNTIXXXXXXXXXXXX-LAVAVMQAQSYYLIPVVHMSGGAFVGNTXXXXXXAIYMSGIEHHLKFEDITFESNSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVETFDGSEQFTSSLFEGNSAD 469
            MHCTDMTFANGNASSGGAMFVGESSVRFSGAT+F GNVAT DTTDDGGHGGAIFAAYSTLVFDGSGDATLT NSASRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GDGT  SYNS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QGG IHA  GXXXXXXXXXXXXXXXXXXXXXXX YT  SXXXXXXXXXXX +NYGGQ X      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXX                      XXXXXXXXXXXX L+V ++QAQ Y LIPVVHMSGGAFVGNT      A Y+S IE    FEDIT+ESNSAT                             GGAVETFDGSEQFTSSLF+GNSAD
Sbjct:  155 MHCTDMTFANGNASSGGAMFVGESSVRFSGATAFTGNVATDDTTDDGGHGGAIFAAYSTLVFDGSGDATLTTNSASRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGTHLSYNSGTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGVIHAAPGXXXXXXXXXXXXXXXXXXXXXXXIYTHLSXXXXXXXXXXXTNNYGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISASFAGGAIRAGDSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVILVQAQDY-LIPVVHMSGGAFVGNTAAGDGGATYISDIEDRYNFEDITYESNSATNGGAVAASRAEATGTFSRCSFLGNTASKNGGAVETFDGSEQFTSSLFKGNSAD 623          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 7.330e-31
Identity = 117/257 (45.53%), Postives = 142/257 (55.25%), Query Frame = 0
Query:  378 SGGAFVGNTXXXXXXAIYMSGIEHHLKFEDITFESNSA-----TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVETFDGSEQFTSSLFEGNSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGYMGP 629
            +G  F+ N       A+Y+S  E+   F    FE+NSA                                   GGAVET  G +QF S  FEGNSAD             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  N L CA G +    +E+  T+  R+   C DCP W++     I    V P C+ PLEH++A+  G T ETLSI  GYWRAT +SD+IL C+NA AC+GG+TG++ FCA GYMGP
Sbjct:  337 AGATFINNRANFGG-ALYLSTCENAFNFAQFVFENNSALDGGAVAVYQSGSETFGLPVVFFECTFLDNVASGNGGAVETLAGQQQFISCDFEGNSADVGGAMRLGGSAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDLTCAVGSYRNDTEEEGATA--RFGTVCFDCPPWDDSAGNDITRGTVTPECAAPLEHSSADAVGATLETLSIDKGYWRATNESDRILACYNADACSGGQTGSESFCASGYMGP 590          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 9.880e-31
Identity = 77/184 (41.85%), Postives = 95/184 (51.63%), Query Frame = 0
Query:  446 GGAVETFDGSEQFTSSLFEGNSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGYMGP 629
            GGAVET  G ++F S  FEGNSA                                             + N L+C AG + +   + EG   +R+E  CLDCP+ ++CH   +  + V P C  PLEHTTA  PG+T ETL I  GYWRAT +SDKIL C+N  AC GG+TGAD FCA GYMGP
Sbjct:  459 GGAVETLSGRQEFISCDFEGNSA-YVGGAMRLGGTVDVRNCSFLSNSATSRGLAIAVVAFANISGASFDRNELYCEAGLYRE---DTEGEPSARFETVCLDCPECDDCH---VTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGP 635          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.500e-19
Identity = 78/259 (30.12%), Postives = 104/259 (40.15%), Query Frame = 0
Query:  382 FVGNTXXXXXXAIYMSGIEHHLKFEDITFESNSA----------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVETFDGSEQFTSSLFEGNSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EDNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGYMGP 629
            FVGNT      AI++SG      F +I+  SNSA          +                             GGAV+T  G ++F +S+FEGN+A                                                N   C  G FL+   E+ GT    YEA C  CP   EC  C+ +   ++P CS  LEH+ +    VT + L I PGYWRAT  S+ +L C+NA AC GG TG++ +C  GY GP
Sbjct:  313 FVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLEC--EESGTL---YEAICDGCP--VECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGP 564          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.070e-17
Identity = 53/112 (47.32%), Postives = 66/112 (58.93%), Query Frame = 0
Query:  515 DNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGY 626
            DN + C +GFFL  +  D      RY   C  C   EEC++C +  +  +PTC+   +H  A+  G T ETLSI PGYWRAT  S  IL C NA AC+GGETGA  +CA GY
Sbjct:  710 DNHVVCPSGFFLDFVDGD------RYSNVCSGC---EECNDCVVADSSEVPTCTITPDH--AQSTGNTIETLSIDPGYWRATPSSRNILACHNADACSGGETGAADYCAEGY 810          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: A0A6H5JZ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ56_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.890e-17
Identity = 41/43 (95.35%), Postives = 41/43 (95.35%), Query Frame = 0
Query:  586 LSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGYMG 628
            LS SPGYWRAT QSDKILPCFNAGACNGGETGADLFCAHGYMG
Sbjct:    2 LSTSPGYWRATNQSDKILPCFNAGACNGGETGADLFCAHGYMG 44          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 6.030e-17
Identity = 86/259 (33.20%), Postives = 110/259 (42.47%), Query Frame = 0
Query:  381 AFVGNTXXXXXXAIYMSGIEHHLKFEDITFESNSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GGAVETFDGSEQFTSSLFEGNSADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EDNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGYMGP 629
            +F GN+      A+++SG      F D++F SN A                                       GGAV++  G +   +S+F+GNSA+         XXXXXXXXXXXX                          N   C    FL+    D GT    +EA C  C     C  C+ D    +PTCS  ++H T+    VT ETLSI PGYWRAT  S +ILPC+NA AC GG TG   +C   Y GP
Sbjct:  762 SFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGT----FEAVCDGCR--VACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGP 1014          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 7.250e-16
Identity = 52/115 (45.22%), Postives = 64/115 (55.65%), Query Frame = 0
Query:  515 DNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGYMGP 629
            DN   C +GFFL  +         RY   C  C   EEC +C +  +  +PTC+   +HT +   G T ETLSI PGYWRAT  +  IL C N+ AC GGETGA  +CA GY GP
Sbjct:  807 DNDAVCPSGFFLDFVDG------HRYSDVCSGC---EECSDCGVADSSEVPTCTITPDHTQST--GNTIETLSIDPGYWRATPSTIIILACHNSDACLGGETGAADYCAEGYEGP 910          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: A0A6H5L4F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F7_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 6.840e-14
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0
Query:  516 NALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATK 597
            N L+CAAGF+    ++ E  S +R+E  CL+  DW EC  C I+ +D  P C  PLEHT+A+  GVTFETL +  G+WRAT+
Sbjct:  395 NELYCAAGFYRHDAEKQE--SNARFEKVCLE-RDWNECDGCFIERSDDTPVCEAPLEHTSADTDGVTFETLKVDGGFWRATQ 473          
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 8.540e-13
Identity = 70/260 (26.92%), Postives = 93/260 (35.77%), Query Frame = 0
Query:  381 AFVGNTXXXXXXAIYMSGIEHHLKFEDITFESNSA----------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAVETFDGSEQFTSSLFEGNSA-DAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDWEECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSDKILPCFNAGACNGGETGADLFCAHGYMGP 629
            +FV N+      A+Y+S       F D+ F+SNSA          +                             GGAV++  G + F  ++F GN A                                                N  +CA   FL        TS    + AC  C     C  C      V+P CS  + H+ ++   VT ETLSI PGYWRAT  S ++L C+N  AC GG TGA  +C  GY GP
Sbjct:  355 SFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNY------TSGDALDEACSGCQ--TTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGP 604          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8088.19428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FM10_ECTSI2.200e-4772.98Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
A0A6H5KX12_9PHAE7.330e-3145.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7J9_9PHAE9.880e-3141.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Z8_ECTSI1.500e-1930.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLP6_9PHAE1.070e-1747.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ56_9PHAE4.890e-1795.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2X5_ECTSI6.030e-1733.20Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FV90_ECTSI7.250e-1645.22Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5L4F7_9PHAE6.840e-1448.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH1_ECTSI8.540e-1326.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 503..528
e-value: 1900.0
score: 5.2
coord: 341..363
e-value: 1600.0
score: 5.7
coord: 377..398
e-value: 3600.0
score: 3.2
coord: 176..197
e-value: 6700.0
score: 1.3
coord: 94..115
e-value: 500.0
score: 9.4
coord: 432..453
e-value: 5300.0
score: 2.1
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 98..116
e-value: 0.0027
score: 15.5
coord: 407..424
e-value: 3.5E-4
score: 18.3
coord: 382..398
e-value: 0.0023
score: 15.7
coord: 181..198
e-value: 7.2E-4
score: 17.3
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 32..55
e-value: 0.11
score: 13.1
coord: 179..196
e-value: 0.024
score: 15.1
coord: 382..395
e-value: 0.086
score: 13.4
coord: 98..113
e-value: 0.051
score: 14.1
NoneNo IPR availablePANTHERPTHR11319G PROTEIN-COUPLED RECEPTOR-RELATEDcoord: 152..448
coord: 515..628
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 377..523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8088contigEcto-sp13_S_contig8088:4146..6575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8088.19428.1mRNA_Ecto-sp13_S_contig8088.19428.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8088 4146..6575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8088.19428.1 ID=prot_Ecto-sp13_S_contig8088.19428.1|Name=mRNA_Ecto-sp13_S_contig8088.19428.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=629bp
MHCTDMTFANGNASSGGAMFVGESSVRFSGATSFAGNVATHDTTDDGGHG
GAIFAAYSTLVFDGSGDATLTVNSASRDGGAIYALWSDIFWESNQGNVFS
DNVADRNGGAIYTHGSTVSLDGDGTRFSYNSANAGGAVYAYDSTVSWSGD
DTYLSSNLANHGAAIYADASTVSWDGDGTEFSHNSADSQGGAIHATAGST
VYWDGDGTEFSFNSAESDGGAIYTDFSTVYWDGDYTEFTHNYGGQGGSIR
AYDSKMSWIGNGTRFSSSSSSEGGAMFVTRTSLSWDGNGTHFSNNSAIAG
GAIRAGESKTSWHGEMTSFSNNSASDDGGAMYMDYGGSLRCDGNTIFSNN
IAGGDGGALAVAVMQAQSYYLIPVVHMSGGAFVGNTAAGDGGAIYMSGIE
HHLKFEDITFESNSATNGGAVAASRTEAAITFSRCTFLGNTASKNGGAVE
TFDGSEQFTSSLFEGNSADAGGALSLIGGTANISGCSFLSNSALTRGFAI
AVVGSATIRRSSFEDNALHCAAGFFLQGIQEDEGTSVSRYEAACLDCPDW
EECHNCTIDAADVLPTCSRPLEHTTAEVPGVTFETLSISPGYWRATKQSD
KILPCFNAGACNGGETGADLFCAHGYMGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence