prot_Ecto-sp13_S_contig80621.19402.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80621.19402.1
Unique Nameprot_Ecto-sp13_S_contig80621.19402.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
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BLAST of mRNA_Ecto-sp13_S_contig80621.19402.1 vs. uniprot
Match: A0A6H5KNZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ7_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 6.390e-20
Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:    6 FAPSWRAIYAEEHGRLYFYNLDTGETTWDPPPQSREGAIETSGPPPA 52
            FA SWRAI+AEEHGRLYFYN+DTGETTWDPPPQSREGA  TSGPPPA
Sbjct:   46 FATSWRAIFAEEHGRLYFYNVDTGETTWDPPPQSREGA--TSGPPPA 90
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BLAST of mRNA_Ecto-sp13_S_contig80621.19402.1 vs. uniprot
Match: D8LFS2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFS2_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.670e-14
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 
Query:   16 EEHGRLYFYNLDTGETTWDPPPQSREGAIETSGPPPA 52
            EEHGRLYFYNLDTGETTWDPPPQSREG  ETSGPPPA
Sbjct:   44 EEHGRLYFYNLDTGETTWDPPPQSREG--ETSGPPPA 78
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BLAST of mRNA_Ecto-sp13_S_contig80621.19402.1 vs. uniprot
Match: A0A8H5D1R4_9AGAR (WW domain-containing protein n=1 Tax=Leucoagaricus leucothites TaxID=201217 RepID=A0A8H5D1R4_9AGAR)

HSP 1 Score: 47.4 bits (111), Expect = 9.350e-5
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0 
Query:    7 APSWRAIYAEEHGRLYFYNLDTGETTWDPPPQSREGAIETSGPPPA 52
            A  W+AIYA E+   YFYN  TGETTW  P Q  + A  +SG PP+
Sbjct:   74 AQHWQAIYAPEYNAYYFYNSQTGETTWTNPLQPSDSA--SSGIPPS 117
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80621.19402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KNZ7_9PHAE6.390e-2089.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFS2_ECTSI1.670e-1494.59WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A8H5D1R4_9AGAR9.350e-552.17WW domain-containing protein n=1 Tax=Leucoagaricus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 5..38
e-value: 5.3E-4
score: 29.3
IPR001202WW domainPFAMPF00397WWcoord: 8..36
e-value: 5.3E-11
score: 42.4
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 10..36
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 4..38
score: 11.96
NoneNo IPR availableGENE3D2.20.70.10coord: 3..48
e-value: 2.4E-10
score: 41.8
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 3..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80621contigEcto-sp13_S_contig80621:3..158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80621.19402.1mRNA_Ecto-sp13_S_contig80621.19402.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80621 3..158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80621.19402.1 ID=prot_Ecto-sp13_S_contig80621.19402.1|Name=mRNA_Ecto-sp13_S_contig80621.19402.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
PPPPYFAPSWRAIYAEEHGRLYFYNLDTGETTWDPPPQSREGAIETSGPP
PA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf