prot_Ecto-sp13_S_contig806.19398.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig806.19398.1
Unique Nameprot_Ecto-sp13_S_contig806.19398.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: D8LRP9_ECTSI (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP9_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 6.800e-88
Identity = 132/139 (94.96%), Postives = 133/139 (95.68%), Query Frame = 0
Query:    1 MPEGNVHHSNDG-VEPKEIATRTPTACFGSALISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISH 138
            MPEGNV HSNDG  EPKE A R+PTACFGSALISSKIPPRC GLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISH
Sbjct:    1 MPEGNVQHSNDGGEEPKENARRSPTACFGSALISSKIPPRCRGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISH 139          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: A0A6V1NB11_HETAK (Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NB11_HETAK)

HSP 1 Score: 145 bits (365), Expect = 4.490e-40
Identity = 73/115 (63.48%), Postives = 86/115 (74.78%), Query Frame = 0
Query:   31 LISSKIPPRCTGLDGEGGV-------ILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISH 138
            L  S +P  C  +   GG        ILGIDEAGRGPV+GPM YGAAYWS ADD+E+SA GFDDSKALT+DQR SLFD+I  TP VGWV+R ISA E+S++M RKVP SLN+IS+
Sbjct:   10 LFKSPVPESCRTVLASGGFADKGPECILGIDEAGRGPVMGPMVYGAAYWSKADDEEISAMGFDDSKALTADQRASLFDKIKETPSVGWVIRSISAEEISNQMLRKVPVSLNIISY 124          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: A0A7S2NW08_9STRA (Ribonuclease n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NW08_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.600e-31
Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 0
Query:   31 LISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISH 138
            ++ S IP +C   D    VILGIDEAGRGPVLGPMTY AAYW+  DD+ M +KGF DSK +T + R +++D + +T E+G+V+R++ A E+S  M RK PY+LN +SH
Sbjct:    4 IVVSDIPKKCLEQD----VILGIDEAGRGPVLGPMTYAAAYWATEDDEVMKSKGFQDSKTMTKESRKAIYDNMKQTAELGFVVRVLHASEISRNMLRKTPYNLNAMSH 107          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: A0A6A3Y691_9STRA (Ribonuclease n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y691_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.080e-29
Identity = 63/109 (57.80%), Postives = 81/109 (74.31%), Query Frame = 0
Query:   29 SALISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVIS 137
            + L++S  P RC  LDG   VILGIDEAGRGPV+GPM YGAAYW  AD++ M A GFDDSKAL+++ R  LF+++  T  +GW++RLISA E+SDKM R+   +LN IS
Sbjct:    9 TVLLASDCPSRC--LDGVP-VILGIDEAGRGPVMGPMVYGAAYWPVADNEAMCALGFDDSKALSAESRAQLFEKMQSTEGLGWIVRLISAVEISDKMQRQTS-NLNEIS 113          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: A0A835YL34_9STRA (Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL34_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.500e-29
Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 0
Query:   51 LGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISH 138
            +GIDEAGRGPVLGPMTYGAAYWS  DD+ +   G+DDSKAL+ D+R  L+  I     +GWVLR++ ARELS +M R+ P+SLN ISH
Sbjct:    1 MGIDEAGRGPVLGPMTYGAAYWSMNDDEAIKKLGYDDSKALSEDKREKLYKGIMAEQRIGWVLRVLGARELSARMLRRAPHSLNAISH 88          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: A0A081AN68_PHYPR (Ribonuclease n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081AN68_PHYPR)

HSP 1 Score: 113 bits (282), Expect = 1.520e-28
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 0
Query:   31 LISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVIS 137
            L++S  P  C  L+G   V+LGIDEAGRGPV+GPM YGAAYW  AD+  MSA GFDDSKAL+++ R  LF+++  T  +GW++RLISA E+SDKM R+   +LN +S
Sbjct:   13 LLASDCPASC--LNGVP-VMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEGLGWIVRLISAAEISDKMQRQTS-NLNEMS 115          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: A0A8J5M4W1_9STRA (Ribonuclease n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M4W1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.910e-28
Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 0
Query:   29 SALISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVIS 137
            + L++S  P RC  L+G   V+LGIDEAGRGPV+GPM YGAAYW  AD+  MSA GFDDSKAL+++ R  LF+++  T  +GW++RLISA E+SDKM R+   +LN IS
Sbjct:   10 TVLLASDCPARC--LNGAP-VMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEGLGWIVRLISAAEISDKMQRQTS-NLNEIS 114          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: K3WMP3_GLOUD (Ribonuclease n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMP3_GLOUD)

HSP 1 Score: 113 bits (283), Expect = 7.300e-28
Identity = 58/107 (54.21%), Postives = 81/107 (75.70%), Query Frame = 0
Query:   31 LISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVIS 137
            L++S +P  C  L+G   V+LGIDEAGRGPV+GPM YGAA+W  A + EMSA GFDDSKAL+++ R  LF+++    E+GW++R+ISA+E+SDKM R+   +LN +S
Sbjct:   18 LLASDVPENC--LNGVP-VMLGIDEAGRGPVMGPMVYGAAFWPVAQNDEMSALGFDDSKALSAESREGLFEKMKANKELGWIVRMISAQEISDKMQRQTS-NLNEMS 120          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: W2JEM4_PHYPR (Ribonuclease n=16 Tax=Phytophthora TaxID=4783 RepID=W2JEM4_PHYPR)

HSP 1 Score: 113 bits (282), Expect = 8.970e-28
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 0
Query:   31 LISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVIS 137
            L++S  P  C  L+G   V+LGIDEAGRGPV+GPM YGAAYW  AD+  MSA GFDDSKAL+++ R  LF+++  T  +GW++RLISA E+SDKM R+   +LN +S
Sbjct:   13 LLASDCPASC--LNGVP-VMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEGLGWIVRLISAAEISDKMQRQTS-NLNEMS 115          
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Match: A0A3R7NFH8_9STRA (Ribonuclease n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NFH8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.800e-27
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 0
Query:   31 LISSKIPPRCTGLDGEGGVILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVIS 137
            L++S  P  C  LDG   V+LGIDEAGRGPV+GPM YGAAYW  AD+  MSA GFDDSKAL+++ R  LF+++  T  +GW++RLISA E+S+KM R+   +LN +S
Sbjct:   11 LLASDCPSSC--LDGVP-VMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMRSTEGLGWIVRLISAAEISNKMQRQTS-NLNEMS 113          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig806.19398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP9_ECTSI6.800e-8894.96Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A6V1NB11_HETAK4.490e-4063.48Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=28... [more]
A0A7S2NW08_9STRA4.600e-3152.78Ribonuclease n=1 Tax=Leptocylindrus danicus TaxID=... [more]
A0A6A3Y691_9STRA1.080e-2957.80Ribonuclease n=3 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A835YL34_9STRA2.500e-2961.36Ribonuclease n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A081AN68_PHYPR1.520e-2856.07Ribonuclease n=1 Tax=Phytophthora parasitica P1976... [more]
A0A8J5M4W1_9STRA6.910e-2856.88Ribonuclease n=1 Tax=Phytophthora aleatoria TaxID=... [more]
K3WMP3_GLOUD7.300e-2854.21Ribonuclease n=1 Tax=Globisporangium ultimum (stra... [more]
W2JEM4_PHYPR8.970e-2856.07Ribonuclease n=16 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A3R7NFH8_9STRA1.800e-2756.07Ribonuclease n=2 Tax=Phytophthora kernoviae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 51..128
e-value: 1.6E-17
score: 64.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 20..138
e-value: 7.9E-32
score: 112.6
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 29..138
NoneNo IPR availablePANTHERPTHR10954:SF7RIBONUCLEASE H2 SUBUNIT Acoord: 29..138
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 49..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig806contigEcto-sp13_S_contig806:19396..21423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig806.19398.1mRNA_Ecto-sp13_S_contig806.19398.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig806 19396..21423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig806.19398.1 ID=prot_Ecto-sp13_S_contig806.19398.1|Name=mRNA_Ecto-sp13_S_contig806.19398.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
MPEGNVHHSNDGVEPKEIATRTPTACFGSALISSKIPPRCTGLDGEGGVI
LGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLF
DRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024567RNase_HII/HIII_dom
IPR036397RNaseH_sf
IPR001352RNase_HII/HIII
IPR012337RNaseH-like_sf