prot_Ecto-sp13_S_contig80555.19392.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80555.19392.1
Unique Nameprot_Ecto-sp13_S_contig80555.19392.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length55
Homology
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.120e-15
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:   16 ILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            ++  GT+QGWQD+STWSRGQAWAIYGFTMV RYLKEQRFL
Sbjct:  157 LVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFL 196          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: D7FUK3_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK3_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.530e-15
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 0
Query:   20 GTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            GT+QGWQD+STWSRGQAWAIYGFTMV RYL EQRFL
Sbjct:    6 GTYQGWQDDSTWSRGQAWAIYGFTMVHRYLTEQRFL 41          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.160e-13
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 0
Query:   20 GTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            G +QGWQD+STWSRGQAWA+YGFTMV RYLK+QRFL
Sbjct:  118 GAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFL 153          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.690e-13
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0
Query:   20 GTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            GT+QGWQD+STWSRGQAWA+YGF MV RYLK++RFL
Sbjct:  161 GTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFL 196          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 5.870e-13
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:   16 ILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            ++  GT+QGWQD+STWSRGQAWAIYGF MV RYL++ RFL
Sbjct:  215 LVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFL 254          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: UPI00197E02EF (Glycoside hydrolase family 88 protein n=4 Tax=Paenibacillus TaxID=44249 RepID=UPI00197E02EF)

HSP 1 Score: 65.5 bits (158), Expect = 4.390e-11
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    3 SDHTLYHRHILLHILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            S HT Y   +  + +  GT QG+QD STW+RGQAW +YGF +  RYLKE RFL
Sbjct:  196 SYHTFYFDQLTGNAIRGGTGQGFQDGSTWTRGQAWGVYGFALAYRYLKEPRFL 248          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: A0A1R1ANP5_9BACL (Glucuronyl hydrolase n=5 Tax=Bacillales TaxID=1385 RepID=A0A1R1ANP5_9BACL)

HSP 1 Score: 65.1 bits (157), Expect = 5.950e-11
Identity = 30/55 (54.55%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    1 RYSDHTLYHRHILLHILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            R S HT Y      H L  GTHQG++D STW+RGQAW IYGF +  RY K+  FL
Sbjct:  190 RSSYHTFYFDPKTGHALRGGTHQGYEDGSTWTRGQAWGIYGFALAYRYTKDAAFL 244          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: UPI001C0FA9C8 (glycoside hydrolase family 88 protein n=1 Tax=unclassified Paenibacillus TaxID=185978 RepID=UPI001C0FA9C8)

HSP 1 Score: 64.7 bits (156), Expect = 8.170e-11
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    3 SDHTLYHRHILLHILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            S HT Y      H L  GTHQG++D STW+RGQAW IYGF +  RY K+  FL
Sbjct:  190 SYHTFYFDPSTGHALRGGTHQGYEDGSTWTRGQAWGIYGFALAYRYTKDAAFL 242          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: F0SAJ8_PSESL (Glycosyl hydrolase family 88 n=1 Tax=Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / CCUG 39354 / LMG 10337 / NBRC 100064 / NCIMB 13643) TaxID=762903 RepID=F0SAJ8_PSESL)

HSP 1 Score: 64.7 bits (156), Expect = 8.400e-11
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   16 ILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            +L   THQG+ DES W+RGQAWAIYG+TM  RY K+QR+L
Sbjct:  235 VLQRNTHQGYSDESAWARGQAWAIYGYTMCYRYTKDQRYL 274          
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Match: A0A6C0NY43_9BACL (Glucuronyl hydrolase n=1 Tax=Paenibacillus rhizovicinus TaxID=2704463 RepID=A0A6C0NY43_9BACL)

HSP 1 Score: 64.3 bits (155), Expect = 1.120e-10
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    3 SDHTLYHRHILLHILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLKEQRFL 55
            S HT Y      H +  GTHQG+QD STW+RGQAW IYGF +  RY +E  FL
Sbjct:  192 SYHTFYFDPDTGHAIRGGTHQGFQDGSTWTRGQAWGIYGFALAYRYFQEPAFL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80555.19392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQV0_9PHAE2.120e-1582.50GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FUK3_ECTSI2.530e-1588.89Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5JQR3_9PHAE1.160e-1383.33GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FQV4_ECTSI1.690e-1380.56Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
D7FUJ9_ECTSI5.870e-1372.50Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
UPI00197E02EF4.390e-1154.72Glycoside hydrolase family 88 protein n=4 Tax=Paen... [more]
A0A1R1ANP5_9BACL5.950e-1154.55Glucuronyl hydrolase n=5 Tax=Bacillales TaxID=1385... [more]
UPI001C0FA9C88.170e-1154.72glycoside hydrolase family 88 protein n=1 Tax=uncl... [more]
F0SAJ8_PSESL8.400e-1165.00Glycosyl hydrolase family 88 n=1 Tax=Pseudopedobac... [more]
A0A6C0NY43_9BACL1.120e-1054.72Glucuronyl hydrolase n=1 Tax=Paenibacillus rhizovi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012341Six-hairpin glycosidase-like superfamilyGENE3D1.50.10.10coord: 3..55
e-value: 4.8E-17
score: 63.7
NoneNo IPR availablePANTHERPTHR36845FAMILY NOT NAMEDcoord: 18..55
IPR008928Six-hairpin glycosidase superfamilySUPERFAMILY48208Six-hairpin glycosidasescoord: 6..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80555contigEcto-sp13_S_contig80555:2..166 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80555.19392.1mRNA_Ecto-sp13_S_contig80555.19392.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80555 2..166 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80555.19392.1 ID=prot_Ecto-sp13_S_contig80555.19392.1|Name=mRNA_Ecto-sp13_S_contig80555.19392.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
RYSDHTLYHRHILLHILSAGTHQGWQDESTWSRGQAWAIYGFTMVRRYLK
EQRFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0123416hp_glycosidase-like_sf
IPR0089286-hairpin_glycosidase_sf