prot_Ecto-sp13_S_contig8053.19388.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8053.19388.1
Unique Nameprot_Ecto-sp13_S_contig8053.19388.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length595
Homology
BLAST of mRNA_Ecto-sp13_S_contig8053.19388.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE)

HSP 1 Score: 650 bits (1678), Expect = 5.170e-218
Identity = 476/636 (74.84%), Postives = 480/636 (75.47%), Query Frame = 0
Query:    1 SDKGEIAKHRKQLDDFHDKLKAKQDAEKKAKAEAADAEKRRRDLARAQSR---------------------------------------------------------------------------------------------ATSGAAA----GGAARSFVGRKLAGRGPGGRRRRPAAADSGTPAERGTGEGDRGXXXXXXXXXXXXXXXXXXXGGSGGILKVTAVPTAATAGGQDEXXXXXXXXXXXXXXXXXAVGGAEGESAXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKSKSDHGRASAGDEXXXXXXXXXXXXXXXXXXXXXXX---KPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVPALQASPQYAPGPPQQ 536
            SDKGEIAKHRKQLDD HDKLKAKQDAEKKAKAE ADAEKRRRDLARAQSR                                                                                             + +GAAA    GGAAR FVGRKLAGRGPGGR RRP  A SGTPA +GTG+GDRGXXXXXXXXXXXX  XXXXX     ILKVTAV TAATAGGQD      XXXXXXXXXXXX          XXXXXXXXXXX                GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSK KSDHGRASAGDE XXXXXXXXXXXXXXXXXXXXXX   KPMVT VPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEA KEQQQQQ PANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVP LQASP YAPGPPQQ
Sbjct:  274 SDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAELADAEKRRRDLARAQSRPPNGVGGSPITAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAKGVSAASKPGRDPPAAAADSSGAPGTGSXXXXXXXXXXXXXXXXXXXXSETGAAAXXXXGGAARYFVGRKLAGRGPGGRVRRPTVAFSGTPAGQGTGKGDRGXXXXXXXXXXXXAGXXXXXXXXXXILKVTAVSTAATAGGQDGTAAGGXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXTAASAPAASRSAGIGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKGKSDHGRASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKRKPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEALKEQQQQQAPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVPTLQASPSYAPGPPQQ 908          
BLAST of mRNA_Ecto-sp13_S_contig8053.19388.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI)

HSP 1 Score: 506 bits (1303), Expect = 1.920e-169
Identity = 383/541 (70.79%), Postives = 385/541 (71.16%), Query Frame = 0
Query:    1 SDKGEIAKHRKQLDDFHDKLKAKQDAEKKAKAEAADAEKRRRDLARAQSRATSGAAAGGAARSFVGRKLAGRGPGGRRRRPAAADSGTPAERGTGEGDRGXXXXXXXXXXXXXXXXXXXGGSGGILKVTAVPTAATAGGQDEXXXXXXXXXXXXXXXXXAVGGA---EGESAXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQ---------------------VVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKSKSDHGRASAGDEXXXXXXXXXXXXXXXXXXXXXXX-----KPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 503
            SDKGEIAKHRKQLDD HDKLKAKQDAEKKAKAEAADA+KRRRDLAR                                                                                 VTAVPTAATAGGQD                  A GGA   +GE  XXXXXXXXXXXXXXXXXXXXXXXXXXX         GPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQ                     VVKEFHSEDAATAVSETPQESDSV A TMASHHAGHRHWAERVKREREMERKFHGKSGGRSK             XXXXXXXXXXXXXXXXXXXXXXX     KPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ
Sbjct:  223 SDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAEAADADKRRRDLAR---------------------------------------------------------------------------------VTAVPTAATAGGQD----------------GTADGGAAATDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQESDSVAATTMASHHAGHRHWAERVKREREMERKFHGKSGGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 666          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8053.19388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K714_9PHAE5.170e-21874.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNV8_ECTSI1.920e-16970.79TFIIS N-terminal domain-containing protein (Fragme... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8053contigEcto-sp13_S_contig8053:2416..6616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8053.19388.1mRNA_Ecto-sp13_S_contig8053.19388.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8053 2416..6616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8053.19388.1 ID=prot_Ecto-sp13_S_contig8053.19388.1|Name=mRNA_Ecto-sp13_S_contig8053.19388.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=595bp
SDKGEIAKHRKQLDDFHDKLKAKQDAEKKAKAEAADAEKRRRDLARAQSR
ATSGAAAGGAARSFVGRKLAGRGPGGRRRRPAAADSGTPAERGTGEGDRG
GAAAAGRDGAAAAGRGDAAGGSGGILKVTAVPTAATAGGQDETTAGGAAA
TDGDEASAAAVGGAEGESAGAEGESAAAAAKAAAAPAASGTAGIGSGPPP
IVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAA
TAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRS
KSKSDHGRASAGDEEEEAGGVADVEAAAATAAARKKRKPMVTTVPWRRPG
PYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPD
AASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVT
LQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRS
MSQQALSTPSNVHLTLPAGVPALQASPQYAPGPPQQLPPPPPPRPAQQQP
PSSYAVPVVDTAGVPQQQQQQQLPPVGTVVAAAAAGRAAAPAVRA
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