prot_Ecto-sp13_S_contig805.19383.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig805.19383.1
Unique Nameprot_Ecto-sp13_S_contig805.19383.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length218
Homology
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BLAST of mRNA_Ecto-sp13_S_contig805.19383.1 vs. uniprot
Match: D7FYG0_ECTSI (Glutamyl-tRNA(Gln) amidotransferase, B subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG0_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.370e-32
Identity = 70/83 (84.34%), Postives = 71/83 (85.54%), Query Frame = 0 
Query:   40 YLAARKHTQSMHARRVALLREVIRPTAPASKLLLEAVTIVALQEMELHLSSGGADWSGGRAGTFEGEAGYRYFPEPDIPPLAL 122
            YLAA  HTQ MHAR VA LREVIRPTAPA KLLLEAVT+VALQEMEL LSS G D SGGRA TFEGE GYRYFPEPDIPPLAL
Sbjct:   53 YLAAVMHTQRMHARLVAGLREVIRPTAPARKLLLEAVTVVALQEMELPLSSRGGDGSGGRAVTFEGETGYRYFPEPDIPPLAL 135
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig805.19383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYG0_ECTSI1.370e-3284.34Glutamyl-tRNA(Gln) amidotransferase, B subunit n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig805contigEcto-sp13_S_contig805:14783..17325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig805.19383.1mRNA_Ecto-sp13_S_contig805.19383.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig805 14782..17325 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig805.19383.1 ID=prot_Ecto-sp13_S_contig805.19383.1|Name=mRNA_Ecto-sp13_S_contig805.19383.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp
SARCSGFWACRTATGRTGSFVSTSTSSSGPRAKHASIPKYLAARKHTQSM
HARRVALLREVIRPTAPASKLLLEAVTIVALQEMELHLSSGGADWSGGRA
GTFEGEAGYRYFPEPDIPPLALHVVATEMAFRALRVSRRKEGAVPAGAPA
VGRGRCRSVGRVARGILLRGGGRVGPRGLLRVAHRGHRRFPQQVQKCFLR
VSQDGCSCSGVPPQFLRS
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