prot_Ecto-sp13_S_contig8045.19379.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8045.19379.1
Unique Nameprot_Ecto-sp13_S_contig8045.19379.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8045.19379.1 vs. uniprot
Match: A0A6H5KD18_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD18_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 1.910e-51
Identity = 95/98 (96.94%), Postives = 95/98 (96.94%), Query Frame = 0 
Query:    1 MAPPLALLLVARLALGTVLARRIDPTLELLFGDDVMDLYSTNKKVINKVDMPFAKDAQDVPGRKKMKGKGVQRQPRPDGEESRGGEGVEAESEPEADL 98
            MAPPLALLLVARLALGTVLARRIDPTLELLFGDDVMDLYSTNKKVINKVDMPFAKDAQDVPGRKKMKGKGVQRQPRPDGEE RGGEGV AESEPEA L
Sbjct:  302 MAPPLALLLVARLALGTVLARRIDPTLELLFGDDVMDLYSTNKKVINKVDMPFAKDAQDVPGRKKMKGKGVQRQPRPDGEEGRGGEGVTAESEPEAHL 399
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8045.19379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD18_9PHAE1.910e-5196.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..98
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.829

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8045contigEcto-sp13_S_contig8045:2712..3328 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8045.19379.1mRNA_Ecto-sp13_S_contig8045.19379.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8045 2029..3932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8045.19379.1 ID=prot_Ecto-sp13_S_contig8045.19379.1|Name=mRNA_Ecto-sp13_S_contig8045.19379.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
MAPPLALLLVARLALGTVLARRIDPTLELLFGDDVMDLYSTNKKVINKVD
MPFAKDAQDVPGRKKMKGKGVQRQPRPDGEESRGGEGVEAESEPEADL*
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