prot_Ecto-sp13_S_contig80271.19349.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig80271.19349.1
Unique Nameprot_Ecto-sp13_S_contig80271.19349.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: D7G7K1_ECTSI (Rit1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K1_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.140e-27
Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    2 QFVAGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHSRR 49
            QFV+GLVEAYR+SGAAYPVFANLRNGLWYGK+WDGTCYFKSTDGHSRR
Sbjct:   11 QFVSGLVEAYRRSGAAYPVFANLRNGLWYGKDWDGTCYFKSTDGHSRR 58          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A151ZJA8_9MYCE (Putative initiator tRNA phosphoribosyl-transferase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZJA8_9MYCE)

HSP 1 Score: 62.4 bits (150), Expect = 4.550e-10
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 SQFVAGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGH 46
            S+F+  L+E Y++     PV ANLR G WY  +WDGTCYFKSTDGH
Sbjct:   11 SKFIKELIEIYKE----LPVIANLRCGYWYFDKWDGTCYFKSTDGH 52          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A7S4E179_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4E179_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 5.450e-9
Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    8 VEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHS 47
            VE  ++    +PVFANLRNGLWY      TCYFKSTDGH+
Sbjct:   39 VELLQRRHPGFPVFANLRNGLWYVSPGTPTCYFKSTDGHA 78          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A835YSK0_9STRA (Initiator tRNA phosphoribosyl transferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSK0_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.100e-9
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 SQFVAGLVEAYRQSGA--AYPVFANLRNGLWYG--KEWDGTCYFKSTDGH 46
            S ++   ++A R      A+P FANLRNG WYG    W+GTCYFKS DGH
Sbjct:   65 SHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGH 114          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A388K2T9_CHABU (Ig-like domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K2T9_CHABU)

HSP 1 Score: 57.0 bits (136), Expect = 3.640e-8
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 SQFVAGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGH 46
            S FV  + + Y    ++ P+ ANLR GLWY + +DGTCYFKSTDGH
Sbjct:   85 SMFVDEIAQRY----SSLPLLANLRCGLWYSRRFDGTCYFKSTDGH 126          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A8J4LTB7_9CHLO (Rit1_C domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LTB7_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 6.820e-8
Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    5 AGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHS 47
            A  V   R    A P+ ANLR GLWY ++ DGTCYFKSTDGH+
Sbjct:   41 AAFVSEVRALYPALPLLANLRCGLWYTRQADGTCYFKSTDGHN 83          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A8J4CP68_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CP68_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 6.830e-8
Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    5 AGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHS 47
            A  V   R    A P+ ANLR GLWY ++ DGTCYFKSTDGH+
Sbjct:   41 AAFVSEVRALYPALPLLANLRCGLWYTRQADGTCYFKSTDGHN 83          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A7S3XDB8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XDB8_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 9.290e-8
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    8 VEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHS 47
            VE  RQ     PV ANLR GLWY  + +GTCYFKSTDGH+
Sbjct:   41 VEEVRQWYKGIPVLANLRCGLWYAPKPEGTCYFKSTDGHN 80          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A0A2R6XUT9_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUT9_MARPO)

HSP 1 Score: 55.8 bits (133), Expect = 9.300e-8
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 SQFVAGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHS 47
            S FV+ +   +R+     P+ ANLR GLWY  ++DGTCYFKSTDGH+
Sbjct:   38 SLFVSEIRHLWRE----LPLLANLRCGLWYSSDFDGTCYFKSTDGHN 80          
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Match: A8HVT9_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HVT9_CHLRE)

HSP 1 Score: 55.1 bits (131), Expect = 1.640e-7
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    5 AGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHS 47
            A  V   R      P+ ANLR GLWY ++ DGTCYFKSTDGH+
Sbjct:   30 AAFVSEIRALYPTLPLLANLRCGLWYARQPDGTCYFKSTDGHN 72          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig80271.19349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7K1_ECTSI2.140e-2793.75Rit1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A151ZJA8_9MYCE4.550e-1058.70Putative initiator tRNA phosphoribosyl-transferase... [more]
A0A7S4E179_9EUKA5.450e-960.00Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A835YSK0_9STRA8.100e-952.00Initiator tRNA phosphoribosyl transferase-domain-c... [more]
A0A388K2T9_CHABU3.640e-854.35Ig-like domain-containing protein n=1 Tax=Chara br... [more]
A0A8J4LTB7_9CHLO6.820e-858.14Rit1_C domain-containing protein n=2 Tax=Volvox re... [more]
A0A8J4CP68_9CHLO6.830e-858.14Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A7S3XDB8_9CHLO9.290e-862.50Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A2R6XUT9_MARPO9.300e-853.19Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A8HVT9_CHLRE1.640e-755.81Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033449Rit1, N-terminal domainPFAMPF17184Rit1_Ccoord: 2..48
e-value: 4.1E-11
score: 42.9
IPR007306tRNA A64-2'-O-ribosylphosphate transferasePANTHERPTHR31811FAMILY NOT NAMEDcoord: 2..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig80271contigEcto-sp13_S_contig80271:50..199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig80271.19349.1mRNA_Ecto-sp13_S_contig80271.19349.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig80271 50..199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig80271.19349.1 ID=prot_Ecto-sp13_S_contig80271.19349.1|Name=mRNA_Ecto-sp13_S_contig80271.19349.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
SQFVAGLVEAYRQSGAAYPVFANLRNGLWYGKEWDGTCYFKSTDGHSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033449Rit1_N
IPR007306Rit1