prot_Ecto-sp13_S_contig7989.19289.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7989.19289.1
Unique Nameprot_Ecto-sp13_S_contig7989.19289.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length259
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7989.19289.1 vs. uniprot
Match: D8LRK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK9_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.600e-120
Identity = 225/264 (85.23%), Postives = 228/264 (86.36%), Query Frame = 0 
Query:    1 MQPNVGTGNAEGEDMWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVAAQPLTSEGKPQQQPSTPSXXXXXXXXXXXXX------TSPTGAGYQHPRSVPSGHRDQGYQEADRRFASLLAKGNAETSSGGGTAGVVRAGIPGPWEPVAGPTEGQQYGRAAGHHDDPGQRTEYARPGAYDFNARQEEYGGGAHNHAYPSRAAPHXXXXXXXXXXXXXXXFEEGGRGFPLXXXXXXXHPGVGPHAAAFQVTSPPAILALH 258
            MQPNVGTGNAEGEDMWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVA QP T+EGKPQ       XXXXXXXXXXXXX      TSP GAGYQ PRSVPSGHRDQG+QEADRRFASLLAKGNAE SSGGGTAGVVRAGIPGPWEPVAGPTEGQQYGRAAGH DDPGQRTEYARPGAYD NARQEEYG               XXXXXXXXXXXXXXX EEGGRGFPLXXXXXXXHPGVGPHAAAFQVTSPPA+LALH
Sbjct:    1 MQPNVGTGNAEGEDMWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVAVQPHTAEGKPQXXXXXXXXXXXXXXXXXXXXXXXXXXTSPAGAGYQRPRSVPSGHRDQGFQEADRRFASLLAKGNAEASSGGGTAGVVRAGIPGPWEPVAGPTEGQQYGRAAGHQDDPGQRTEYARPGAYDPNARQEEYGXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXEEGGRGFPLXXXXXXXHPGVGPHAAAFQVTSPPAVLALH 263
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BLAST of mRNA_Ecto-sp13_S_contig7989.19289.1 vs. uniprot
Match: A0A6H5JL72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL72_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 2.040e-120
Identity = 218/254 (85.83%), Postives = 226/254 (88.98%), Query Frame = 0 
Query:    1 MQPNVGTGNAEGEDMWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVAAQPLTSEGKPQQQPSTPSXXXXXXXXXXXXX-------TSPTGAGYQHPRSVPSGHRDQGYQEADRRFASLLAKGNAETSSGGGTAGVVRAGIPGPWEPVAGPTEGQQYGRAAGHHDDPGQRTEYARPGAYDFNARQEEYGGGAHNHAYPSRAAPHXXXXXXXXXXXXXXXFEEGGRGFPLXXXXXXXHPGVGPHAAAFQ 247
            MQPNVGTGN E ED+WDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVA QP T+EG+PQQ      XXXXXXXXXXXXX       TSP GAGYQ PRSVPSGHRDQG+QEADRRFASLLAKGN +TSSGGGTAGVVRAGIPGPWEPVAGPTEGQQYGRAAGH DD GQRTEYARP AYD NA+QEEYGG AHN++YPSRAAPH   XXXXXXXXXXXXFEEGGRGFPLXXXXXXXHPGVGPHAAAFQ
Sbjct:   19 MQPNVGTGNVE-EDVWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAAQGVAVQPHTAEGRPQQXXXXXXXXXXXXXXXXXXXXXXXXXXTSPAGAGYQRPRSVPSGHRDQGFQEADRRFASLLAKGNVKTSSGGGTAGVVRAGIPGPWEPVAGPTEGQQYGRAAGHQDDLGQRTEYARPEAYDPNAQQEEYGGEAHNYSYPSRAAPHHPQXXXXXXXXXXXXFEEGGRGFPLXXXXXXXHPGVGPHAAAFQ 271
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7989.19289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRK9_ECTSI1.600e-12085.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JL72_9PHAE2.040e-12085.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7989contigEcto-sp13_S_contig7989:2428..4806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7989.19289.1mRNA_Ecto-sp13_S_contig7989.19289.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7989 2428..4806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7989.19289.1 ID=prot_Ecto-sp13_S_contig7989.19289.1|Name=mRNA_Ecto-sp13_S_contig7989.19289.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=259bp
MQPNVGTGNAEGEDMWDDRAILKAFDDALNSHSRKPVDGVEARKWNKHAA
QGVAAQPLTSEGKPQQQPSTPSSTSRAAAAASGGGTSPTGAGYQHPRSVP
SGHRDQGYQEADRRFASLLAKGNAETSSGGGTAGVVRAGIPGPWEPVAGP
TEGQQYGRAAGHHDDPGQRTEYARPGAYDFNARQEEYGGGAHNHAYPSRA
APHHPQPPPHPPGGAAGGFEEGGRGFPLPPPPPPPHPGVGPHAAAFQVTS
PPAILALH*
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