prot_Ecto-sp13_S_contig79811.19282.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig79811.19282.1
Unique Nameprot_Ecto-sp13_S_contig79811.19282.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp13_S_contig79811.19282.1 vs. uniprot
Match: D7FIS1_ECTSI (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS1_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.170e-15
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:    1 EITLERRGEAGSVAWLTLNKPEKLNALSLSMVRGMSAAI 39
            EITLERRGEAGSVAWLTLNKPEKLNALSL+MVRGMSAAI
Sbjct:   19 EITLERRGEAGSVAWLTLNKPEKLNALSLTMVRGMSAAI 57
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79811.19282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIS1_ECTSI2.170e-1597.44Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.300.220coord: 1..39
e-value: 6.6E-9
score: 37.7
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig79811contigEcto-sp13_S_contig79811:57..173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig79811.19282.1mRNA_Ecto-sp13_S_contig79811.19282.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig79811 57..173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig79811.19282.1 ID=prot_Ecto-sp13_S_contig79811.19282.1|Name=mRNA_Ecto-sp13_S_contig79811.19282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
EITLERRGEAGSVAWLTLNKPEKLNALSLSMVRGMSAAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom_sf