prot_Ecto-sp13_S_contig79626.19261.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig79626.19261.1
Unique Nameprot_Ecto-sp13_S_contig79626.19261.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: D8LKI4_ECTSI (GPN-loop GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI4_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.150e-17
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    6 KPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            KPVVCIVMGMAGSGKTTLLQRLNLYT E+GIKSYFINLDPAV
Sbjct:   51 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAV 92          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: X6M6W3_RETFI (GPN-loop GTPase n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6M6W3_RETFI)

HSP 1 Score: 70.5 bits (171), Expect = 4.990e-14
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 ARTKKKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            A   KKPV+C+V+GMAGSGKTTL+QRL+++  E  I SYFINLDPAV
Sbjct:   31 ATPSKKPVICLVIGMAGSGKTTLMQRLSMHVNENKIPSYFINLDPAV 77          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: A0A7S0DP97_9EUKA (GPN-loop GTPase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DP97_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 1.580e-11
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    2 RTKKKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            +++KKPV+CIV+GMAGSGKTTL+QRLN    E+ +  Y INLDPAV
Sbjct:   49 KSEKKPVMCIVIGMAGSGKTTLMQRLNATIHEKNVPGYIINLDPAV 94          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: A0A835YZW9_9STRA (GPN-loop GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.130e-11
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    4 KKKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            ++KPVVCIV+GMAGSGKTTLLQR+NL       + Y+INLDPAV
Sbjct:   38 RRKPVVCIVLGMAGSGKTTLLQRINLQMNSSDKQGYYINLDPAV 81          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: A0A0S4IST9_BODSA (GPN-loop GTPase n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IST9_BODSA)

HSP 1 Score: 63.2 bits (152), Expect = 1.960e-10
Identity = 27/43 (62.79%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    5 KKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            K+P+V +V+GMAG+GKTTL+ RL  Y+ E+G++SYFINLDPA+
Sbjct:   27 KQPLVILVVGMAGTGKTTLVHRLQHYSAEQGLRSYFINLDPAL 69          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: A0A7S3IG67_9SPIT (GPN-loop GTPase (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IG67_9SPIT)

HSP 1 Score: 60.8 bits (146), Expect = 2.000e-10
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    3 TKKKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            TKKKP+V IV+GMAGSGKTT + +L  + +E+G ++Y +NLDPAV
Sbjct:   34 TKKKPLVLIVLGMAGSGKTTFVNKLTSFLSEQGKRTYNVNLDPAV 78          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: W6L0V0_9TRYP (GPN-loop GTPase n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6L0V0_9TRYP)

HSP 1 Score: 62.8 bits (151), Expect = 2.620e-10
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    5 KKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            K+PVV +V+GMAG+GKTTL+  L  Y  E+GI+SYFINLDPAV
Sbjct:   21 KQPVVILVIGMAGTGKTTLVHTLQNYALEKGIRSYFINLDPAV 63          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: W6KJU2_9TRYP (GPN-loop GTPase n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KJU2_9TRYP)

HSP 1 Score: 62.4 bits (150), Expect = 3.640e-10
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    5 KKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            K+PVV +V+GMAG+GKTTL+  L  Y T +GI+SYFINLDPAV
Sbjct:   25 KQPVVILVVGMAGTGKTTLVHALQNYATGKGIRSYFINLDPAV 67          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: L8GIS8_ACACA (GPN-loop GTPase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIS8_ACACA)

HSP 1 Score: 61.6 bits (148), Expect = 7.110e-10
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    4 KKKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPA 46
            KKKPVVCIV+GMAGSGKTTL+QRLN +   +    Y INLDPA
Sbjct:   28 KKKPVVCIVIGMAGSGKTTLMQRLNAHLHMQKQPPYVINLDPA 70          
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Match: A0A7S3RDM7_EMIHU (GPN-loop GTPase (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RDM7_EMIHU)

HSP 1 Score: 59.3 bits (142), Expect = 4.090e-9
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 ARTKKKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV 47
            A   ++PV CIV+GMAGSGKTTL+QRLN +  E     Y INLDPAV
Sbjct:   28 AGATRRPVACIVLGMAGSGKTTLMQRLNSHLHEAKRPYYLINLDPAV 74          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig79626.19261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LKI4_ECTSI1.150e-1795.24GPN-loop GTPase n=1 Tax=Ectocarpus siliculosus Tax... [more]
X6M6W3_RETFI4.990e-1468.09GPN-loop GTPase n=1 Tax=Reticulomyxa filosa TaxID=... [more]
A0A7S0DP97_9EUKA1.580e-1165.22GPN-loop GTPase n=1 Tax=Amorphochlora amoebiformis... [more]
A0A835YZW9_9STRA2.130e-1168.18GPN-loop GTPase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A0S4IST9_BODSA1.960e-1062.79GPN-loop GTPase n=1 Tax=Bodo saltans TaxID=75058 R... [more]
A0A7S3IG67_9SPIT2.000e-1060.00GPN-loop GTPase (Fragment) n=1 Tax=Strombidium inc... [more]
W6L0V0_9TRYP2.620e-1067.44GPN-loop GTPase n=1 Tax=Phytomonas sp. isolate Har... [more]
W6KJU2_9TRYP3.640e-1067.44GPN-loop GTPase n=1 Tax=Phytomonas sp. isolate EM1... [more]
L8GIS8_ACACA7.110e-1069.77GPN-loop GTPase n=1 Tax=Acanthamoeba castellanii s... [more]
A0A7S3RDM7_EMIHU4.090e-961.70GPN-loop GTPase (Fragment) n=2 Tax=Emiliania huxle... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004130GPN-loop GTPasePFAMPF03029ATP_bind_1coord: 12..47
e-value: 2.1E-10
score: 40.8
IPR004130GPN-loop GTPasePANTHERPTHR21231XPA-BINDING PROTEIN 1-RELATEDcoord: 3..47
NoneNo IPR availableGENE3D3.40.50.300coord: 1..47
e-value: 1.9E-13
score: 52.3
IPR030230GPN-loop GTPase 1PANTHERPTHR21231:SF8GPN-LOOP GTPASE 1coord: 3..47
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig79626contigEcto-sp13_S_contig79626:472..612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig79626.19261.1mRNA_Ecto-sp13_S_contig79626.19261.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig79626 472..612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig79626.19261.1 ID=prot_Ecto-sp13_S_contig79626.19261.1|Name=mRNA_Ecto-sp13_S_contig79626.19261.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
ARTKKKPVVCIVMGMAGSGKTTLLQRLNLYTTEEGIKSYFINLDPAV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004130Gpn
IPR030230Gpn1/Npa3/XAB1
IPR027417P-loop_NTPase